PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0418s0008.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 310aa    MW: 34846.9 Da    PI: 6.6465
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0418s0008.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.22.4e-151664148
                         TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48
                         +g W++eEde+l +++ ++Gg+ +W++++ ++g+ R +k+c++rw +yl
  Kaladp0418s0008.1.p 16 KGLWSPEEDEKLRNYILRHGGHgSWSSVPIEIGLQRNGKSCRLRWINYL 64
                         678******************9*************************97 PP
2Myb_DNA-binding51.32.7e-1670115148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg ++t+E+e ++ +++ lG++ W+ Ia++++ gRt++++k++w+++l
  Kaladp0418s0008.1.p  70 RGMFSTDEEEMILALHRDLGNK-WSQIAQKLP-GRTDNEIKNYWHTHL 115
                          788*******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MALDKPKKVP KPKHRKGLWS PEEDEKLRNY ILRHGGHGSW SSVPIEIGLQ RNGKSCRLRW  60
INYLRPGLKR GMFSTDEEEM ILALHRDLGN KWSQIAQKLP GRTDNEIKNY WHTHLKKRSA  120
RAFSLAPKTS QELINSWSTS VSSSLSSPTS YSSKPLTQVP ISFEFCHTFR ASSACTEPAV  180
DDHDHHTMLS SGLNGFPNDG IQSSLPKLFF EEWLSLDRTN TSNQQLNPSD DQLAAASILM  240
GDTFMDNEFL QHERSSALDF ESGQGGNWAN DIVSYPDLCL DGSLADGCFN FGISNDHDEF  300
SGFKYVMYP*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G25560.13e-56MYB family protein