PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0403s0001.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 239aa MW: 26767.3 Da PI: 5.4014 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 52.2 | 1.5e-16 | 105 | 155 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrdp k r++lg+f++ +Aaka++ a+ k++g Kaladp0403s0001.1.p 105 HYRGVRRRP-WGKFAAEIRDP---ArKGSRVWLGTFDSDVDAAKAYDFAAFKMRG 155 8********.**********8...4445**********99*************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MDETSTLDLI RSHLLADFAS TESFISSLHS DLLLDSTPST TTSPYDAPFW SLFPVKREMT 60 DTDHNYNLLE FIKPEFFDIA TSQREDTGKT SSSEETSSPP FDRKHYRGVR RRPWGKFAAE 120 IRDPARKGSR VWLGTFDSDV DAAKAYDFAA FKMRGSKAIL NFPLQAGKEA GPPENSGRRR 180 RRRRDSRAET TATESAAGSS SSCFNNNDDD NNNEPWTPSS HNLTFTTTTT TEDQMLLV* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 178 | 183 | RRRRRR |
2 | 178 | 184 | RRRRRRR |
3 | 178 | 185 | RRRRRRRD |
4 | 179 | 184 | RRRRRR |
5 | 179 | 185 | RRRRRRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07580.1 | 1e-28 | ERF family protein |