PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0337s0008.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 444aa MW: 49344.8 Da PI: 4.791

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0337s0008.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	38	2.9e-12	258	301	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++Er+RR+++N+++ +Lr+l+Pk + Kl+ a+iL A++++k+Lq Kaladp0337s0008.3.p 258 IAERKRRKKLNERLYKLRSLVPKiS------KLDRASILGDAIDFLKELQ 301 79*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MEQLRTLVSV HGWECCVVWR VSKDQRFIEW LDCCCAGAEN LPQEPTFAAS QCRDSVILHS 60 RTKACDLLAQ FPPFMLIEDS GVYAETLISN QPRWLHLSQS STSADMVPQF ATRLLIPVPG 120 GLIELFAARP VSENQHIIDC IAEYSKLPPE KEANSISSTD MTAFYNEISL FGPKFETTNS 180 TDIFFDEFMN QLYNSSVKDG LLQGMDSMLV SDVSNTGVPV KGSGNDRGQQ GHDVMEAAGN 240 IEMGRKKSGK GPQSKNLIAE RKRRKKLNER LYKLRSLVPK ISKLDRASIL GDAIDFLKEL 300 QKQKKDLEDE LQQQQSDDEY HHEDTNPFLG QTEDTMDQDQ LEAQVEVSKI DGGDALFIKL 360 LCENKPGSFV GVLEALDHLG LEVTNVNINT HETFVSNVLL VQGKEGSCVM VEADSVKDSL 420 LSTTRNSIPT GSLRRPNLAA RQQ*

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MEQLRTLVSV HGWECCVVWR VSKDQRFIEW LDCCCAGAEN LPQEPTFAAS QCRDSVILHS  60
RTKACDLLAQ FPPFMLIEDS GVYAETLISN QPRWLHLSQS STSADMVPQF ATRLLIPVPG  120
GLIELFAARP VSENQHIIDC IAEYSKLPPE KEANSISSTD MTAFYNEISL FGPKFETTNS  180
TDIFFDEFMN QLYNSSVKDG LLQGMDSMLV SDVSNTGVPV KGSGNDRGQQ GHDVMEAAGN  240
IEMGRKKSGK GPQSKNLIAE RKRRKKLNER LYKLRSLVPK ISKLDRASIL GDAIDFLKEL  300
QKQKKDLEDE LQQQQSDDEY HHEDTNPFLG QTEDTMDQDQ LEAQVEVSKI DGGDALFIKL  360
LCENKPGSFV GVLEALDHLG LEVTNVNINT HETFVSNVLL VQGKEGSCVM VEADSVKDSL  420
LSTTRNSIPT GSLRRPNLAA RQQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	266	RKKSGKGPQSKNLIAERKRRKK
2	260	267	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	1e-61	bHLH family protein