PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0337s0008.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 465aa MW: 51660.1 Da PI: 4.5449

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0337s0008.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.9	3.1e-12	279	322	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++Er+RR+++N+++ +Lr+l+Pk + Kl+ a+iL A++++k+Lq Kaladp0337s0008.1.p 279 IAERKRRKKLNERLYKLRSLVPKiS------KLDRASILGDAIDFLKELQ 322 79*******************66......****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MEQLRTLVSV HGWECCVVWR VSKDQRFIEW LDCCCAGAEN LPQEPTFAAS QCRDSVILHS 60 RTKACDLLAQ FPPFMLIEDS GVYAETLISN QPRWLHLSQS STSADMVPQF ATRLLIPVPG 120 GLIELFAARP VSENQHIIDC IAEYSKLPPE KEANSISSTD MTAFYNEISL FGPKFETTNS 180 TDIFFDEFMN QLYNSSVKDG LLQGMDSMLV SDVSNTGVPV KGSGNDRGQQ GHDVMEAAGN 240 IEMGRSDSIS DCSDQLDEDD ADAIYRKKSG KGPQSKNLIA ERKRRKKLNE RLYKLRSLVP 300 KISKLDRASI LGDAIDFLKE LQKQKKDLED ELQQQQSDDE YHHEDTNPFL GQTEDTMDQD 360 QLEAQVEVSK IDGGDALFIK LLCENKPGSF VGVLEALDHL GLEVTNVNIN THETFVSNVL 420 LVQGKEGSCV MVEADSVKDS LLSTTRNSIP TGSLRRPNLA ARQQ*

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MEQLRTLVSV HGWECCVVWR VSKDQRFIEW LDCCCAGAEN LPQEPTFAAS QCRDSVILHS  60
RTKACDLLAQ FPPFMLIEDS GVYAETLISN QPRWLHLSQS STSADMVPQF ATRLLIPVPG  120
GLIELFAARP VSENQHIIDC IAEYSKLPPE KEANSISSTD MTAFYNEISL FGPKFETTNS  180
TDIFFDEFMN QLYNSSVKDG LLQGMDSMLV SDVSNTGVPV KGSGNDRGQQ GHDVMEAAGN  240
IEMGRSDSIS DCSDQLDEDD ADAIYRKKSG KGPQSKNLIA ERKRRKKLNE RLYKLRSLVP  300
KISKLDRASI LGDAIDFLKE LQKQKKDLED ELQQQQSDDE YHHEDTNPFL GQTEDTMDQD  360
QLEAQVEVSK IDGGDALFIK LLCENKPGSF VGVLEALDHL GLEVTNVNIN THETFVSNVL  420
LVQGKEGSCV MVEADSVKDS LLSTTRNSIP TGSLRRPNLA ARQQ*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	266	287	RKKSGKGPQSKNLIAERKRRKK
2	281	288	ERKRRKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16910.1	4e-70	bHLH family protein