PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0278s0008.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 873aa MW: 99387.4 Da PI: 9.4686 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 21.8 | 4.3e-07 | 226 | 269 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rWT Ed+ l+ vk+ + +W Ia +g++Rt+ qc r+q Kaladp0278s0008.2.p 226 RWTRTEDKELLLIVKEKEMSNWIDIAVSLGTNRTPFQCLARFQR 269 9***************************************9995 PP | |||||||
2 | Myb_DNA-binding | 35.5 | 2.4e-11 | 278 | 321 | 2 | 46 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 W +eEd +l av+ +G +W +a+ + +Rt+ qc +rw k Kaladp0278s0008.2.p 278 REWEEEEDARLCAAVRVFGESNWQMVASVLD-KRTGTQCSNRWKK 321 68*****************************.***********98 PP | |||||||
3 | Myb_DNA-binding | 43.6 | 6.8e-14 | 331 | 375 | 2 | 47 |
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 grWT +Ed++ + vk++G ++W++Ia+ ++ gRt qc++rw + Kaladp0278s0008.2.p 331 GRWTIDEDKRMKVSVKLFGAKCWSKIAQFVP-GRTQVQCRERWVNC 375 8******************************.***********986 PP | |||||||
4 | Myb_DNA-binding | 42.6 | 1.4e-13 | 384 | 425 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +WT++Ed++l a++++ W+++a++++ Rt++qc+ rw Kaladp0278s0008.2.p 384 PWTEDEDLKLMTAITEYNYC-WSKVAACIP-PRTDNQCRRRWMV 425 8*****************99.*********.9**********86 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 873 aa Download sequence |
MHEPTLLPVK GSGFPRPAQL LLDSIKKNRL CQKLIHNRLI QIEARIEESK KLKDRVKILK 60 DFQVSTRKRV GLVLSQKKDH RVQLISAPKR GEKKASAMKF GPEDNRDVAF YKDAITKFPL 120 ALQRQRWSNE ERDNLRKGIK QEFQKALLEK SVDLISYSEG SYGISSDIDN VMASIKGLEI 180 TPENIRAYLP KVNWDNFASI YHQGRSGAEC EARWLNWEDP LRNNTRWTRT EDKELLLIVK 240 EKEMSNWIDI AVSLGTNRTP FQCLARFQRS LNAQMVKREW EEEEDARLCA AVRVFGESNW 300 QMVASVLDKR TGTQCSNRWK KSLNPARVRV GRWTIDEDKR MKVSVKLFGA KCWSKIAQFV 360 PGRTQVQCRE RWVNCLDPSL NWDPWTEDED LKLMTAITEY NYCWSKVAAC IPPRTDNQCR 420 RRWMVLCPDD VYRLQAAKKI QQVALISNFV DRETERPDLG PEDFVPPLIL CPAFEPYSEE 480 PTNKRKRKRR EKRASPMNNA EYNMGCSDSQ KKKRCPRRRK EAQVDNEATL GAVDVNEATE 540 AVICLNEYVG TVENSTIVHP GSFECNEQGK ADSSLYLELE PTDTGDEGKC GRSNYLKRKK 600 YKPRRKARAE NVPVQSKAFL PAAQSESMLM NHSFSHEIPV ENNTTSTQKR RTTIKQNKKK 660 SCSIYKKNDY EFAAGTLSLQ MQTPDKSASI PGAIVATSKS CKRERVTASS SLKDAVSFHR 720 PSSCSCCLES IVCHQGAVNG TRVNGELIAG KAAACLEEND FIPLASLGKR DKNFSQNEAE 780 YAQEANSRSE MNNKFCCEQP ATSLGEDDSL ALTSFIKRKR NVCNARIENG HNVDKGRKME 840 IISVEQVGAG LNEDDIPLAL FIKKVKRVKE KI* |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 484 | 490 | KRKRKRR |
2 | 484 | 513 | KRKRKRREKRASPMNNAEYNMGCSDSQKKK |
3 | 485 | 514 | KRKRKRREKRASPMNNAEYNMGCSDSQKKK |
4 | 485 | 490 | RKRKRR |
5 | 485 | 492 | RKRKRREK |
6 | 485 | 493 | RKRKRREKR |
7 | 486 | 515 | KRKRKRREKRASPMNNAEYNMGCSDSQKKK |
8 | 487 | 516 | KRKRKRREKRASPMNNAEYNMGCSDSQKKK |
9 | 487 | 494 | RKRKRREK |
10 | 516 | 520 | PRRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G18100.2 | 1e-157 | MYB family protein |