PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0254s0009.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 552aa MW: 61153.7 Da PI: 6.4278

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0254s0009.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	67.5	1.9e-21	118	220	2	100
EEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 k+lt+sd+++ g ++ p+++ae++ + ++ + lt++d +g W +++i+r++++r++lt+GW++Fv+ + L +gD v+F++ Kaladp0254s0009.1.p 118 TKILTQSDANNGGGFSAPRHCAESIfpalnyqEDPPVQ--NLTITDVQGGDWIFRHIFRGTPKRHLLTTGWSKFVNNKMLVAGDAVIFMR 205 699************************996666656..69999****************************************6 PP -SSSEE..EEEEE-SS CS B3 85 dgrsefelvvkvfrks 100 d+ +++l+++++r+s Kaladp0254s0009.1.p 206 DN-LTGKLYIGIRRHS 220 54.9999****985 PP
2	Auxin_resp	63.4	8.6e-22	261	344	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgv.sdldpvrWpnSkWrsLk 83 a a +s Fev+ +Pr ++++Fvv+++ v +al+ +++vGm +km + tedss+ l +G v+ v + l+ +W++S+W++L+ Kaladp0254s0009.1.p 261 AMHAGRGSHFEVILYPRIGSPDFVVNANVVDRALSWRWAVGMGVKMTVATEDSSQSMLlQGHVSVVmNVLERGQWRGSPWKMLQ 344 56677899*********************************************9999998772557889*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 552 aa Download sequence
MFPINFPAAN TVQIDPDLWK ACAGANFKVP SVDDNVYYFA EGHAEQCDSP PPVAEFAFPI 60 IPCRVLHVRF FADRMTDEVF ASVLLQPVGC EFRGALPASG SALGAQVGRE GSRIDSYTKI 120 LTQSDANNGG GFSAPRHCAE SIFPALNYQE DPPVQNLTIT DVQGGDWIFR HIFRGTPKRH 180 LLTTGWSKFV NNKMLVAGDA VIFMRDNLTG KLYIGIRRHS GRNENRSLLS GAGQGTGEDV 240 DEGLWRAGSR GVSARFVKEA AMHAGRGSHF EVILYPRIGS PDFVVNANVV DRALSWRWAV 300 GMGVKMTVAT EDSSQSMLLQ GHVSVVMNVL ERGQWRGSPW KMLQVTWVDP EHRQNVERVS 360 PWQVEYVEHT APLQPIHNPI ELRDPHVQPL TTRNREPLLI MGQEPHSTKA QGDQRTRNFI 420 NPDIHLASMQ GARHLSDVCD LIGGDTHQTQ SEDMFSRSDM SLFRSRITDV NFRGHQLSNF 480 PAERHNSMRS FGTEVGNTLP NGGTNSIQLF GKIIYVKNPI ENQPDDAPCL EFDSSKGDNE 540 AEGMENQSHA S*

Sequence ? help Back to Top

Protein Sequence Length: 552 aa Download sequence

MFPINFPAAN TVQIDPDLWK ACAGANFKVP SVDDNVYYFA EGHAEQCDSP PPVAEFAFPI  60
IPCRVLHVRF FADRMTDEVF ASVLLQPVGC EFRGALPASG SALGAQVGRE GSRIDSYTKI  120
LTQSDANNGG GFSAPRHCAE SIFPALNYQE DPPVQNLTIT DVQGGDWIFR HIFRGTPKRH  180
LLTTGWSKFV NNKMLVAGDA VIFMRDNLTG KLYIGIRRHS GRNENRSLLS GAGQGTGEDV  240
DEGLWRAGSR GVSARFVKEA AMHAGRGSHF EVILYPRIGS PDFVVNANVV DRALSWRWAV  300
GMGVKMTVAT EDSSQSMLLQ GHVSVVMNVL ERGQWRGSPW KMLQVTWVDP EHRQNVERVS  360
PWQVEYVEHT APLQPIHNPI ELRDPHVQPL TTRNREPLLI MGQEPHSTKA QGDQRTRNFI  420
NPDIHLASMQ GARHLSDVCD LIGGDTHQTQ SEDMFSRSDM SLFRSRITDV NFRGHQLSNF  480
PAERHNSMRS FGTEVGNTLP NGGTNSIQLF GKIIYVKNPI ENQPDDAPCL EFDSSKGDNE  540
AEGMENQSHA S*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G77850.1	1e-111	ARF family protein