PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0210s0002.5.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 518aa MW: 57745 Da PI: 4.7471

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0210s0002.5.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.4	7e-15	324	366	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + Er RRd++N+++ +L++l+P++ kK + a+i+e A+eYIk+L Kaladp0210s0002.5.p 324 ATERDRRDNLNNKYTTLKSLIPSP-----KKTDRASIVEDAIEYIKEL 366 78********************.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 518 aa Download sequence
MNLQLMQIIQ TGTCVAMYEE TACFDPNPIA DEGAIQVISN DLASIPPHGN MESSIAIPHF 60 DFDENVKFPV DEFFYKSSSK EDSMVAPTNV VASSAVGTEF QQQMAYDVEN CYYGTESDSR 120 MQEAIHEVNQ ALSYEQSNWV ASGDYEVQDM CYSSENQQQM LQDELVHNGQ GIYTSSSVLD 180 VPHPSAPDLL HLLHLPRSPS SASFLPNSTI SFVNASQSST NFQNGAGLMD AASSSAMFYD 240 PLLHLNLPPQ PPIFKDLFQS LPHGFNLPVP MTGSLFARMD EMERSRGLYH DVDGHLIDDG 300 VLEFTADMPP QMVKGRNGKL KPFATERDRR DNLNNKYTTL KSLIPSPKKT DRASIVEDAI 360 EYIKELTRTI NELKVLVEKK RRVKERMKML KTEASPDPES SSDVKHNSEL NEPLRSSWLQ 420 RKSKDTEVDV RIIDDELTVK LSQRKKANCL LTMSKILEEL QLDLQHVSGG QVGDFYSFVC 480 NTKIGETSCV YAGGIAKRLI EGVERQQAGL GTNKISF*

Sequence ? help Back to Top

Protein Sequence Length: 518 aa Download sequence

MNLQLMQIIQ TGTCVAMYEE TACFDPNPIA DEGAIQVISN DLASIPPHGN MESSIAIPHF  60
DFDENVKFPV DEFFYKSSSK EDSMVAPTNV VASSAVGTEF QQQMAYDVEN CYYGTESDSR  120
MQEAIHEVNQ ALSYEQSNWV ASGDYEVQDM CYSSENQQQM LQDELVHNGQ GIYTSSSVLD  180
VPHPSAPDLL HLLHLPRSPS SASFLPNSTI SFVNASQSST NFQNGAGLMD AASSSAMFYD  240
PLLHLNLPPQ PPIFKDLFQS LPHGFNLPVP MTGSLFARMD EMERSRGLYH DVDGHLIDDG  300
VLEFTADMPP QMVKGRNGKL KPFATERDRR DNLNNKYTTL KSLIPSPKKT DRASIVEDAI  360
EYIKELTRTI NELKVLVEKK RRVKERMKML KTEASPDPES SSDVKHNSEL NEPLRSSWLQ  420
RKSKDTEVDV RIIDDELTVK LSQRKKANCL LTMSKILEEL QLDLQHVSGG QVGDFYSFVC  480
NTKIGETSCV YAGGIAKRLI EGVERQQAGL GTNKISF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	379	384	KKRRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	5e-54	bHLH family protein