PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0210s0002.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 520aa MW: 58012.3 Da PI: 4.8009

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0210s0002.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	46.4	7.1e-15	326	368	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 + Er RRd++N+++ +L++l+P++ kK + a+i+e A+eYIk+L Kaladp0210s0002.1.p 326 ATERDRRDNLNNKYTTLKSLIPSP-----KKTDRASIVEDAIEYIKEL 368 78********************.....9**************99 PP

Sequence ? help Back to Top
Protein Sequence Length: 520 aa Download sequence
MEHSRLLMQI IQTGTCVAMY EETACFDPNP IADEGAIQVI SNDLASIPPH GNMESSIAIP 60 HFDFDENVKF PVDEFFYKSS SKEDSMVAPT NVVASSAVGT EFQQQMAYDV ENCYYGTESD 120 SRMQEAIHEV NQALSYEQSN WVASGDYEVQ DMCYSSENQQ QMLQDELVHN GQGIYTSSSV 180 LDVPHPSAPD LLHLLHLPRS PSSASFLPNS TISFVNASQS STNFQNGAGL MDAASSSAMF 240 YDPLLHLNLP PQPPIFKDLF QSLPHGFNLP VPMTGSLFAR MDEMERSRGL YHDVDGHLID 300 DGVLEFTADM PPQMVKGRNG KLKPFATERD RRDNLNNKYT TLKSLIPSPK KTDRASIVED 360 AIEYIKELTR TINELKVLVE KKRRVKERMK MLKTEASPDP ESSSDVKHNS ELNEPLRSSW 420 LQRKSKDTEV DVRIIDDELT VKLSQRKKAN CLLTMSKILE ELQLDLQHVS GGQVGDFYSF 480 VCNTKIGETS CVYAGGIAKR LIEGVERQQA GLGTNKISF*

Sequence ? help Back to Top

Protein Sequence Length: 520 aa Download sequence

MEHSRLLMQI IQTGTCVAMY EETACFDPNP IADEGAIQVI SNDLASIPPH GNMESSIAIP  60
HFDFDENVKF PVDEFFYKSS SKEDSMVAPT NVVASSAVGT EFQQQMAYDV ENCYYGTESD  120
SRMQEAIHEV NQALSYEQSN WVASGDYEVQ DMCYSSENQQ QMLQDELVHN GQGIYTSSSV  180
LDVPHPSAPD LLHLLHLPRS PSSASFLPNS TISFVNASQS STNFQNGAGL MDAASSSAMF  240
YDPLLHLNLP PQPPIFKDLF QSLPHGFNLP VPMTGSLFAR MDEMERSRGL YHDVDGHLID  300
DGVLEFTADM PPQMVKGRNG KLKPFATERD RRDNLNNKYT TLKSLIPSPK KTDRASIVED  360
AIEYIKELTR TINELKVLVE KKRRVKERMK MLKTEASPDP ESSSDVKHNS ELNEPLRSSW  420
LQRKSKDTEV DVRIIDDELT VKLSQRKKAN CLLTMSKILE ELQLDLQHVS GGQVGDFYSF  480
VCNTKIGETS CVYAGGIAKR LIEGVERQQA GLGTNKISF*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	381	386	KKRRVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	6e-54	bHLH family protein