PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0158s0001.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

G2-like

Protein Properties

Length: 383aa MW: 42234.1 Da PI: 9.4116

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0158s0001.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	97.5	9.6e-31	212	267	1	56
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r+ W+++LH+rF++ ++qLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+ Kaladp0158s0001.1.p 212 KQRRSWSQDLHRRFLHSLQQLGGAHVATPKQIRELMKVDGLTNDEVKSHLQKYRLH 267 79****************************************************97 PP
2	Myb_DNA-binding	35.5	2.3e-11	214	265	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r +W+++++ ++++ +qlGg t+k I + m g+t ++ks++qky+ Kaladp0158s0001.1.p 214 RRSWSQDLHRRFLHSLQQLGGAhvaTPKQIRELMKvDGLTNDEVKSHLQKYR 265 678***************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MEKMQQLDDK YAQALELERK KMLMFERELP LSIELVSLAI ELQRKRLLSS SVDAGAGGGI 60 HQQHRSDQSS SEETTSDCGR VLEFIPLKKP TCASSSESGE HQQDLNQKDG RSGVDEISGN 120 SGQKSDWLRS VQLWNQTPDL PPNKELGRAG SDAAGKKVTS RDGEEACKPL NEEKSVEKSH 180 RQTNESSTSD TKESQKNGGS RKEDKEGSSQ RKQRRSWSQD LHRRFLHSLQ QLGGAHVATP 240 KQIRELMKVD GLTNDEVKSH LQKYRLHTRR PTPPPSRNNA CNGQAPQFVV LGGIWVPQSD 300 YTTMAVAAER EAKVARGVPR TGVYTPMAAP PAQPHHPWQQ IQFNQKPQTK SKNSEGNGGD 360 GLARCISPSM SSTTRATPSP VC*

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MEKMQQLDDK YAQALELERK KMLMFERELP LSIELVSLAI ELQRKRLLSS SVDAGAGGGI  60
HQQHRSDQSS SEETTSDCGR VLEFIPLKKP TCASSSESGE HQQDLNQKDG RSGVDEISGN  120
SGQKSDWLRS VQLWNQTPDL PPNKELGRAG SDAAGKKVTS RDGEEACKPL NEEKSVEKSH  180
RQTNESSTSD TKESQKNGGS RKEDKEGSSQ RKQRRSWSQD LHRRFLHSLQ QLGGAHVATP  240
KQIRELMKVD GLTNDEVKSH LQKYRLHTRR PTPPPSRNNA CNGQAPQFVV LGGIWVPQSD  300
YTTMAVAAER EAKVARGVPR TGVYTPMAAP PAQPHHPWQQ IQFNQKPQTK SKNSEGNGGD  360
GLARCISPSM SSTTRATPSP VC*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25550.1	5e-57	G2-like family protein