PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0110s0002.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 207aa    MW: 22719.3 Da    PI: 8.4942
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0110s0002.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.34.3e-11249454
                         HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                         +h ++Er+RR+++N+ +  Lr+l P+    + k+ + a+i   ++++Ik+L
  Kaladp0110s0002.1.p  2 SHIAVERNRRRQMNEHLKVLRSLTPSF---YIKRGDQASIIGGVIDFIKEL 49
                         89************************9...9******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 207 aa     Download sequence    
MSHIAVERNR RRQMNEHLKV LRSLTPSFYI KRGDQASIIG GVIDFIKELH QVLQVLDSQK  60
RRKKSLSPSP NPSPRPLLQL GTPSSDSSPS PRLLEGFKEL GACCNSPVAD VVAKLSGSNV  120
VLRIICRRAG GQVGKIVSEL ERLCFDVLQL NISSMEDTVL YSFVVKIGLE CLISVEELAL  180
EIQKSLYQDD ITTASTASDS LLAHHL*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.19e-75bHLH family protein