PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0103s0001.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 343aa MW: 37685.3 Da PI: 4.1866

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0103s0001.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	42.8	1.2e-13	11	56	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+W +eEde l++ v ++G+++W++I ++ ++Rt+k+c++rw + Kaladp0103s0001.1.p 11 KGPWKAEEDEVLINHVSKYGPRDWSSIRSKGLLRRTGKSCRLRWVN 56 79***********************888779*********87 PP
2	Myb_DNA-binding	39.7	1.2e-12	67	106	3	44
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrw 44 ++++eE+ ++ ++ G++ W+tIa +++ gRt++++k++w Kaladp0103s0001.1.p 67 KFSAEEERVVIEMQAEIGNK-WATIATYLP-GRTDNDVKNFW 106 79****************.*****.********* PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MAEEDEDQIR KGPWKAEEDE VLINHVSKYG PRDWSSIRSK GLLRRTGKSC RLRWVNKLRP 60 NLKNGCKFSA EEERVVIEMQ AEIGNKWATI ATYLPGRTDN DVKNFWSSRQ KRLARMRQAS 120 CSSATPPPPP PPSSENKCNG GHENLYADED VIPSLEVPEC GVEAEEMGAS TCTFRPDQCP 180 TLFSAYISHE PESLKMVELP ALMMMSSGPL SCEGAEAEGA TGMAAPMITA TERASELGMA 240 PFPPLHDDSL PIMTQPVLPF PAEELLGPAM EEPSFMDIFG ESGDDVMFGE ESESGIMSCN 300 SNVVPENGGP PVTFFDDFPS DMLDQMESLD RLDDSLPSPS QW*

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MAEEDEDQIR KGPWKAEEDE VLINHVSKYG PRDWSSIRSK GLLRRTGKSC RLRWVNKLRP  60
NLKNGCKFSA EEERVVIEMQ AEIGNKWATI ATYLPGRTDN DVKNFWSSRQ KRLARMRQAS  120
CSSATPPPPP PPSSENKCNG GHENLYADED VIPSLEVPEC GVEAEEMGAS TCTFRPDQCP  180
TLFSAYISHE PESLKMVELP ALMMMSSGPL SCEGAEAEGA TGMAAPMITA TERASELGMA  240
PFPPLHDDSL PIMTQPVLPF PAEELLGPAM EEPSFMDIFG ESGDDVMFGE ESESGIMSCN  300
SNVVPENGGP PVTFFDDFPS DMLDQMESLD RLDDSLPSPS QW*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60460.1	6e-70	MYB family protein