PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0102s0140.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 355aa    MW: 39356.6 Da    PI: 9.2855
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0102s0140.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.58.6e-19194227134
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                          Cs C+tt TplWR+gp+g+ktLCnaCG+++rk +
  Kaladp0102s0140.1.p 194 CSDCNTTRTPLWRSGPQGPKTLCNACGIRQRKAR 227
                          *******************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 355 aa     Download sequence    
MMTPMFLNPP NPQYFNLNQD HHQEDHQQQQ VLLENSPFHP AIAASTTSLH LDQGLRMTAT  60
HSMSDQSPAF NDQLKASTNV FFHGESPSYG AQVISTDNYG SHNHDLFIFR QQADQDQHNF  120
NVNEGVVTTD NNGSSLRWMS SKIRMMRKMI NSNCPRTDPR GGSRIITSST SPDHSPQLGI  180
HSDNNHHSNV IRVCSDCNTT RTPLWRSGPQ GPKTLCNACG IRQRKARKAA MEAAAAATNS  240
SNEASSSTST KTTIKLVINK DKKKSRATSN TCVSQHSNKK QAPWKQHQAI NQLADSSHHS  300
NRSTSSSSSK QQLRFEEFAV NLLSKNAAFH RMFPQDEEEG ALLLMALSYG LIQS*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G26150.11e-22GATA family protein