PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0102s0102.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 219aa MW: 23737.9 Da PI: 6.5169 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 57.4 | 3.6e-18 | 57 | 107 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + ++GVr + +g+Wv+eIr+p++ + r++lg+f t+e+Aa+a++ a+ +++g Kaladp0102s0102.1.p 57 PVFRGVRMRN-WGKWVSEIREPRK---KSRIWLGTFPTPEMAARAHDVAAMSIKG 107 579****998.**********843...6**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MIQPSFSSDT VESSCNSAES TQSKMGGIQN KKVKATTAAA AVKKRARGED KCESKHPVFR 60 GVRMRNWGKW VSEIREPRKK SRIWLGTFPT PEMAARAHDV AAMSIKGANA ILNFPELAGS 120 LPRPVSSSPR DVQAAAAKAA AMEHLNLSPS SSASSLTEAD DELCEIVQLP RLDEAADSGR 180 CEFLLMDYSG GGWVYPPLLM EDPIHAFDDA PLWSQDYI* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G25810.1 | 2e-49 | ERF family protein |