PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0102s0089.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

MYB

Protein Properties

Length: 957aa MW: 106464 Da PI: 4.9519

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0102s0089.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.4	3.4e-18	32	78	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l Kaladp0102s0089.1.p 32 KGQWTAEEDEILSKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 78 799**************************9.**********986 PP
2	Myb_DNA-binding	63.6	3.9e-20	84	130	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde +v++v q+G + W+tIa++++ gR +kqc++rw+++l Kaladp0102s0089.1.p 84 KGPWSKEEDEVIVQLVSQYGAKKWSTIAQHLP-GRIGKQCRERWHNHL 130 79****************************.***********97 PP
3	Myb_DNA-binding	49.2	1.2e-15	136	178	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 r++WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ Kaladp0102s0089.1.p 136 RDAWTQEEELALIQAHQVYGNK-WAELTKFLP-GRTDNAIKNHWN 178 789*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 957 aa Download sequence
MNHASQDGAG DRRPKMRPPH GRTSGPTRRS TKGQWTAEED EILSKAVQRF KGKNWKKIAE 60 CFKDRTDVQC LHRWQKVLNP ELIKGPWSKE EDEVIVQLVS QYGAKKWSTI AQHLPGRIGK 120 QCRERWHNHL NPAINRDAWT QEEELALIQA HQVYGNKWAE LTKFLPGRTD NAIKNHWNSS 180 VKKKMETYIA SGLLSKFQGL PHVGGRNQSM SSPASRTQQS SGDESNHKGN DIEDISECSQ 240 GSTAPGCSQN ASDMTNKIFH ARNGFNHTNC SDQMKRERRE ESSEEYFASI EEVNMSIPKI 300 EVNCSVLDQN LSHTSGGLAS DDQFNLQEFP GMSLLELGQD QRYGSAANDS NELLYMPYHN 360 SSLMTAEMSG CEDASILHAS NIQIHDSKGT SASQTTYMRS EAVENSRFQA PSCDSSHLHF 420 HENQLQYGCG LSQVDNFTSG TEGQDLVGRP CSEFMLTENF TEPLCNDGTE YTDLCGHVDN 480 IQFAHDIPDE AAKLAECSQS APPTDELPAA KVEEREQKGG SLFYEPPRFP SLDVPFFSCD 540 LVSSNDLQQE YSPLGIRQLM MSSMNCLTPF RLWDSPAREN SPDALLKSAA KTFNGTPSIL 600 KKRHRDLLSP LSDRRMDKRL DSDSKQNSFS SLARDFSNLD VMFEETATCS TTNQKRDSVS 660 FGDDKENVDP ALMRQKEVER GSSEKDNILC CNEEEKSSND DADQKMQHDA DADAQIVQKS 720 SENLSDNDLE NILIFSPDQV GLEADRVFIP NAWANPPSSA TQHASSINSP SVSRRSLATG 780 SSSKCMPPSY LEIEVSKAGQ ETGTENNCSM FGSTPFKRSF ESPSAWKSPW FINSFLPGPR 840 VDTDISIEDI GYFLSPGERS YDALGLMEQL SERSAAAIAE AHGILGIETP KTTLREGHPD 900 TYDNQPGSHF AQDALPERRV LDFSECETPG KESEVRTESP SVKLFSPSSY LIKGCR*

Sequence ? help Back to Top

Protein Sequence Length: 957 aa Download sequence

MNHASQDGAG DRRPKMRPPH GRTSGPTRRS TKGQWTAEED EILSKAVQRF KGKNWKKIAE  60
CFKDRTDVQC LHRWQKVLNP ELIKGPWSKE EDEVIVQLVS QYGAKKWSTI AQHLPGRIGK  120
QCRERWHNHL NPAINRDAWT QEEELALIQA HQVYGNKWAE LTKFLPGRTD NAIKNHWNSS  180
VKKKMETYIA SGLLSKFQGL PHVGGRNQSM SSPASRTQQS SGDESNHKGN DIEDISECSQ  240
GSTAPGCSQN ASDMTNKIFH ARNGFNHTNC SDQMKRERRE ESSEEYFASI EEVNMSIPKI  300
EVNCSVLDQN LSHTSGGLAS DDQFNLQEFP GMSLLELGQD QRYGSAANDS NELLYMPYHN  360
SSLMTAEMSG CEDASILHAS NIQIHDSKGT SASQTTYMRS EAVENSRFQA PSCDSSHLHF  420
HENQLQYGCG LSQVDNFTSG TEGQDLVGRP CSEFMLTENF TEPLCNDGTE YTDLCGHVDN  480
IQFAHDIPDE AAKLAECSQS APPTDELPAA KVEEREQKGG SLFYEPPRFP SLDVPFFSCD  540
LVSSNDLQQE YSPLGIRQLM MSSMNCLTPF RLWDSPAREN SPDALLKSAA KTFNGTPSIL  600
KKRHRDLLSP LSDRRMDKRL DSDSKQNSFS SLARDFSNLD VMFEETATCS TTNQKRDSVS  660
FGDDKENVDP ALMRQKEVER GSSEKDNILC CNEEEKSSND DADQKMQHDA DADAQIVQKS  720
SENLSDNDLE NILIFSPDQV GLEADRVFIP NAWANPPSSA TQHASSINSP SVSRRSLATG  780
SSSKCMPPSY LEIEVSKAGQ ETGTENNCSM FGSTPFKRSF ESPSAWKSPW FINSFLPGPR  840
VDTDISIEDI GYFLSPGERS YDALGLMEQL SERSAAAIAE AHGILGIETP KTTLREGHPD  900
TYDNQPGSHF AQDALPERRV LDFSECETPG KESEVRTESP SVKLFSPSSY LIKGCR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.2	0.0	MYB family protein