PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0088.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family HSF
Protein Properties Length: 267aa    MW: 30058.9 Da    PI: 8.6769
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0088.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.63.1e-36221132102
                          HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXX CS
         HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkk 91 
                          Fl k+y+++ed+++++liswse+g+sf+v+ + efa+++Lp+yFkh+nf+SFvRQLn+YgF+kv  ++         weF+++ Fk+g++
  Kaladp0101s0088.1.p  22 FLVKTYQLVEDPSVDDLISWSEDGSSFIVWRPAEFARDLLPRYFKHNNFSSFVRQLNTYGFRKVVGDR---------WEFTNEFFKRGER 102
                          9****************************************************************999.........************* PP

                          XXXXXXXXXXX CS
         HSF_DNA-bind  92 ellekikrkks 102
                          +ll+ i r+k 
  Kaladp0101s0088.1.p 103 KLLKGITRRKG 113
                          ********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MARPAAAASA EDELHRSVPP PFLVKTYQLV EDPSVDDLIS WSEDGSSFIV WRPAEFARDL  60
LPRYFKHNNF SSFVRQLNTY GFRKVVGDRW EFTNEFFKRG ERKLLKGITR RKGSTAAAVA  120
VTPLNQIRPS LTEAAATSRL EQVVSSASSP ACTTTTTTTT VNTGSTGNCT HAGPDSELAE  180
ENARLRMENE RLARELSRLR AMWDSVYSLV SNYGRIVNDS DEREESPARG SPRLFGVSIG  240
EKKRVWEEEE RMRKMKMMKF EPLVLD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62020.11e-61HSF family protein