PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0101s0080.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 623aa MW: 68769.5 Da PI: 4.8445

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0101s0080.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	16.7	1.3e-05	433	466	17	55
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++f+ L++l+P+ K++K++ L ++ Y+k+L+ Kaladp0101s0080.2.p 433 DERFSALQSLVPSH-----DKVDKVMLLDATISYLKELE 466 589********7.....7**************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 623 aa Download sequence
MYAFENLRKQ LALAVRCYQW SYAIFWSVSI TQPSVLEWGS GYYNGDIKTR KTSQSEELNA 60 DLIDSQRSDQ LRELYESLAA GDSNSQARRP SAALSPEDLS DTEWYYLVCM SFVFNIGQGL 120 PGRTFEVGQP IWLCNAHIAD SKAYTRSLLA KPSYLQTVVC FPCLGGVVEM GVTEQVPEDM 180 NLIVRIKASF LDDFLPQPNV PNISLPSAIL NNDMELPGIE LDNDYLDANL DPIIECDELD 240 SLSTDDSASK VAPDQVDDSY MVTGGASQVQ SWHFVDEEFS NCVRNSFNTS DCISQTFELS 300 AKAKLPSKIE AHRIPCPAEC TKLESLDVRS DDLHYQSVVS TLLKSSDQLV LGPHLGCCIK 360 GTSFVKWSRV GLSGASSLSD SRSQVMLKKA LFDVGRMHSG GTAVDCTEVL DRYNVPKISR 420 DESDREHLPD VLDERFSALQ SLVPSHDKVD KVMLLDATIS YLKELEKRVV KLESSKEPAP 480 LPVTSIPTKS QDDVERTSDN YGTNRTSSES NPSTNKRKAS HINQTDLQAT SKTSRDSSTD 540 HICVSIVDNN VMIEMRCCWR ECLLLKVLDA IGSLSLDSHS VQSSTAANGI LQLTIKSKFK 600 GSGCPSVGVI RRKLQRILAQ SS*

Sequence ? help Back to Top

Protein Sequence Length: 623 aa Download sequence

MYAFENLRKQ LALAVRCYQW SYAIFWSVSI TQPSVLEWGS GYYNGDIKTR KTSQSEELNA  60
DLIDSQRSDQ LRELYESLAA GDSNSQARRP SAALSPEDLS DTEWYYLVCM SFVFNIGQGL  120
PGRTFEVGQP IWLCNAHIAD SKAYTRSLLA KPSYLQTVVC FPCLGGVVEM GVTEQVPEDM  180
NLIVRIKASF LDDFLPQPNV PNISLPSAIL NNDMELPGIE LDNDYLDANL DPIIECDELD  240
SLSTDDSASK VAPDQVDDSY MVTGGASQVQ SWHFVDEEFS NCVRNSFNTS DCISQTFELS  300
AKAKLPSKIE AHRIPCPAEC TKLESLDVRS DDLHYQSVVS TLLKSSDQLV LGPHLGCCIK  360
GTSFVKWSRV GLSGASSLSD SRSQVMLKKA LFDVGRMHSG GTAVDCTEVL DRYNVPKISR  420
DESDREHLPD VLDERFSALQ SLVPSHDKVD KVMLLDATIS YLKELEKRVV KLESSKEPAP  480
LPVTSIPTKS QDDVERTSDN YGTNRTSSES NPSTNKRKAS HINQTDLQAT SKTSRDSSTD  540
HICVSIVDNN VMIEMRCCWR ECLLLKVLDA IGSLSLDSHS VQSSTAANGI LQLTIKSKFK  600
GSGCPSVGVI RRKLQRILAQ SS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G41315.1	1e-157	bHLH family protein