PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0101s0020.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 365aa    MW: 39293.3 Da    PI: 7.8049
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0101s0020.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA512e-16267300134
                 GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkg 34 
                          C +C  tkTp+WR gp g+ktLCnaCG+++++ +
  Kaladp0101s0020.1.p 267 CLHCEITKTPQWRAGPMGPKTLCNACGVRHKSGR 300
                          99*****************************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 365 aa     Download sequence    
MRSWFLEKMS ADPTSLVVED LDCNSFFGHI EDLLDFPEVN NKNSHNAPLV APGLAWNAPP  60
YSFFNPDLLF IGKGSACTQD LAAELSIPYE DIVQMEWLST FVEDSFSGGD SMTLDKKSFP  120
STKEASADAA VAPVQFLSSS PISVLESSSS SSCSEGSKAL LVSPDSARVR GGCGRPRSKR  180
PRPHTFKPGS AMQLISPAQS FTDTPQLSAS HGAFQGNKFK QSPHLTTEQN KKRKMKPSSS  240
PATPAAEMSN NETGAADPQS QAGVRKCLHC EITKTPQWRA GPMGPKTLCN ACGVRHKSGR  300
LFPEYRPAAS PTFVPSLHSN SHKKVLEMRT ATVHTPATTP PGGKMGSDTH PELIPNEKAI  360
LEYM*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1179183KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54810.21e-38GATA family protein