PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0100s0054.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 314aa    MW: 34825.4 Da    PI: 6.993
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0100s0054.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.70.000241952331154
                          HHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH  11 rRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                          rR +++ +++  L++l+ +      +K + a++L++A  YIk+L
  Kaladp0100s0054.1.p 195 RRSQKLGDKITILQKLVSPY-----GKTDTASVLQEAEIYIKQL 233
                          7889999**********999.....9*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MMSLHAAEIQ NDMLPSLPPQ LYIYCNDSEA QMQSLEFALT NGKVNPLGSD YLCDYDSRLI  60
LNEVGVGIAE YVIPHTTNGY NYQAESSSSS TAERVGYPYS VVENCFMESQ ICDSGLPEFS  120
LPNSQNLVVS PPAIDLRNVK RKQQMEQYSS KSAVANNDTI SRIKRRTNTN NGTRNNNQPH  180
ILETECDYSK VPAVRRSQKL GDKITILQKL VSPYGKTDTA SVLQEAEIYI KQLHTKIANM  240
YELLSSSHVN AATLSQLDAL GGMRTIPLDL RQRGLCVMPV AITRDLTRNN GTMDRGCLAA  300
RTGNNFPTNI IRY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20640.18e-17bHLH family protein