PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0099s0057.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 466aa MW: 51457 Da PI: 7.2167

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0099s0057.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	13.2	0.00016	356	394	12	55
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 R +++ +++ L++l+ + +K + a++L +A+ YIk Lq Kaladp0099s0057.1.p 356 RKEKLGDRITALQQLVAPF-----GKTDTASVLMEAIGYIKFLQ 394 677888999*****998.....8****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MESANIPHHH LDLHQDHQQQ QQLLGPASSS SSSSYDALSA HGGWYGASSN SSNHFAWSAN 60 SSHMNVVGNR IYQNPNTQLY NQYTGEKDEN EDIQIAWRNN NSHNTGSSIE DDRQLNQTLI 120 PAQDQPSNKC KLDLFNSLLF PKFTDMISST QSSIEDLQHL SPTCYMKNDH FQDLNQQHDT 180 KLLIKPAALL SPSGFIQNPF QAGQFLSNVQ HCSGYGGSSS SPLIPNRGTF SQIFPSVNIS 240 NMNNNQSCST TISGSLDVNL RALDLLTSAK FGGAVNHDQP QPHHISLPLK ETHAFGEQHM 300 QQFGHRPTGS LDKLPTSFHG GSTTEAKRSQ PESKSSQTSS KKSRSESRVC PPFKVRKEKL 360 GDRITALQQL VAPFGKTDTA SVLMEAIGYI KFLQNQVETL SVPYMKSSRS RPIKQMQMGQ 420 MMDNDGNVEL KRDLRSRGLC LVPLSCMSYV TTDDSGGWPS SEYHG*

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MESANIPHHH LDLHQDHQQQ QQLLGPASSS SSSSYDALSA HGGWYGASSN SSNHFAWSAN  60
SSHMNVVGNR IYQNPNTQLY NQYTGEKDEN EDIQIAWRNN NSHNTGSSIE DDRQLNQTLI  120
PAQDQPSNKC KLDLFNSLLF PKFTDMISST QSSIEDLQHL SPTCYMKNDH FQDLNQQHDT  180
KLLIKPAALL SPSGFIQNPF QAGQFLSNVQ HCSGYGGSSS SPLIPNRGTF SQIFPSVNIS  240
NMNNNQSCST TISGSLDVNL RALDLLTSAK FGGAVNHDQP QPHHISLPLK ETHAFGEQHM  300
QQFGHRPTGS LDKLPTSFHG GSTTEAKRSQ PESKSSQTSS KKSRSESRVC PPFKVRKEKL  360
GDRITALQQL VAPFGKTDTA SVLMEAIGYI KFLQNQVETL SVPYMKSSRS RPIKQMQMGQ  420
MMDNDGNVEL KRDLRSRGLC LVPLSCMSYV TTDDSGGWPS SEYHG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27660.1	2e-48	bHLH family protein