PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0098s0168.6.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 675aa MW: 74105.5 Da PI: 8.3928

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0098s0168.6.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72	7.7e-23	167	268	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g W++++iyr++++r++lt+GW+ Fv++++L gD v+F Kaladp0098s0168.6.p 167 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVGWRFRHIYRGQPRRHLLTTGWSLFVSQKNLGLGDAVLFL- 254 99**************************963.3445679********************************************. PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 + +++el+++++r+ Kaladp0098s0168.6.p 255 -RGENGELRLGIRRA 268 .4499999**996 PP
2	Auxin_resp	105.3	6.9e-35	293	374	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+ tk++F+v+Y+Pra++++Fv++++k++k++ +++ G+Rf m++e++ds+err+sG+v+g+ dldp+rWpnSkWr+L Kaladp0098s0168.6.p 293 VASAILTKNIFHVFYSPRATHADFVIPIQKYMKSIINPIPTGTRFVMRLEMDDSPERRCSGIVTGLGDLDPYRWPNSKWRCL 374 678999***************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MELDGHHAVR VEERKNAYVS CDGDCGDKAG CARCLSSSSS SSSSSNSPAS LASSSIYVEL 60 WHACAGPLTA LPKKGNVVVY FPQGHLEQVA SNSPFSPTDM PTYDLQPQIF CRVVNVQRLA 120 NKENDEVYTQ LSLLPQPELV GSSLSRSDLL SANGNDEPAL KSTPHMFCKT LTASDTSTHG 180 GFSVPRRAAE DCFPPLDYKQ QRPSQELVAK DLHGVGWRFR HIYRGQPRRH LLTTGWSLFV 240 SQKNLGLGDA VLFLRGENGE LRLGIRRAVR PRNCLPDSSI GNHSSLPTVL SSVASAILTK 300 NIFHVFYSPR ATHADFVIPI QKYMKSIINP IPTGTRFVMR LEMDDSPERR CSGIVTGLGD 360 LDPYRWPNSK WRCLTVRWDE GHATNHQERV SPWEVDASIR LPSPLSFHGS PQLKKLRTCL 420 QSSLQSGIAD DISTAGRSGF LDFEESIRSS SKVLQGQENS GLPSPLYRGD KVNHPLGCCS 480 EVPYLVNQLL LPPRPDHVTV PERLNIQTTG YTTLGKSDVF PTVLQGQEVC PYSAWRKSSI 540 GCNMFSTHQR PKPSFYPVGS AGSRSVYFPP HSRIQKEMQG TAMSISARFT GGSGSFSRPW 600 VHNGMNIDEA QVTAQKLPED ASMPYSLEMN TKDGRNETAS VTPTGCRLFG ISLTADTSPQ 660 NASSQARKHG WEGN*

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MELDGHHAVR VEERKNAYVS CDGDCGDKAG CARCLSSSSS SSSSSNSPAS LASSSIYVEL  60
WHACAGPLTA LPKKGNVVVY FPQGHLEQVA SNSPFSPTDM PTYDLQPQIF CRVVNVQRLA  120
NKENDEVYTQ LSLLPQPELV GSSLSRSDLL SANGNDEPAL KSTPHMFCKT LTASDTSTHG  180
GFSVPRRAAE DCFPPLDYKQ QRPSQELVAK DLHGVGWRFR HIYRGQPRRH LLTTGWSLFV  240
SQKNLGLGDA VLFLRGENGE LRLGIRRAVR PRNCLPDSSI GNHSSLPTVL SSVASAILTK  300
NIFHVFYSPR ATHADFVIPI QKYMKSIINP IPTGTRFVMR LEMDDSPERR CSGIVTGLGD  360
LDPYRWPNSK WRCLTVRWDE GHATNHQERV SPWEVDASIR LPSPLSFHGS PQLKKLRTCL  420
QSSLQSGIAD DISTAGRSGF LDFEESIRSS SKVLQGQENS GLPSPLYRGD KVNHPLGCCS  480
EVPYLVNQLL LPPRPDHVTV PERLNIQTTG YTTLGKSDVF PTVLQGQEVC PYSAWRKSSI  540
GCNMFSTHQR PKPSFYPVGS AGSRSVYFPP HSRIQKEMQG TAMSISARFT GGSGSFSRPW  600
VHNGMNIDEA QVTAQKLPED ASMPYSLEMN TKDGRNETAS VTPTGCRLFG ISLTADTSPQ  660
NASSQARKHG WEGN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein