PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0098s0168.5.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 674aa MW: 74034.4 Da PI: 8.3928

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0098s0168.5.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	72	7.7e-23	167	268	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g W++++iyr++++r++lt+GW+ Fv++++L gD v+F Kaladp0098s0168.5.p 167 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVGWRFRHIYRGQPRRHLLTTGWSLFVSQKNLGLGDAVLFL- 254 99**************************963.3445679********************************************. PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 + +++el+++++r+ Kaladp0098s0168.5.p 255 -RGENGELRLGIRRA 268 .4499999**996 PP
2	Auxin_resp	105.4	6.9e-35	293	374	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+ tk++F+v+Y+Pra++++Fv++++k++k++ +++ G+Rf m++e++ds+err+sG+v+g+ dldp+rWpnSkWr+L Kaladp0098s0168.5.p 293 VASAILTKNIFHVFYSPRATHADFVIPIQKYMKSIINPIPTGTRFVMRLEMDDSPERRCSGIVTGLGDLDPYRWPNSKWRCL 374 678999***************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 674 aa Download sequence
MELDGHHAVR VEERKNAYVS CDGDCGDKAG CARCLSSSSS SSSSSNSPAS LASSSIYVEL 60 WHACAGPLTA LPKKGNVVVY FPQGHLEQVA SNSPFSPTDM PTYDLQPQIF CRVVNVQRLA 120 NKENDEVYTQ LSLLPQPELV GSSLSRSDLL SANGNDEPAL KSTPHMFCKT LTASDTSTHG 180 GFSVPRRAAE DCFPPLDYKQ QRPSQELVAK DLHGVGWRFR HIYRGQPRRH LLTTGWSLFV 240 SQKNLGLGDA VLFLRGENGE LRLGIRRAVR PRNCLPDSSI GNHSSLPTVL SSVASAILTK 300 NIFHVFYSPR ATHADFVIPI QKYMKSIINP IPTGTRFVMR LEMDDSPERR CSGIVTGLGD 360 LDPYRWPNSK WRCLTVRWDE GHATNHQERV SPWEVDASIR LPSPLSFHGS PQLKKLRTCL 420 QSSLQSGIAD DISTGRSGFL DFEESIRSSS KVLQGQENSG LPSPLYRGDK VNHPLGCCSE 480 VPYLVNQLLL PPRPDHVTVP ERLNIQTTGY TTLGKSDVFP TVLQGQEVCP YSAWRKSSIG 540 CNMFSTHQRP KPSFYPVGSA GSRSVYFPPH SRIQKEMQGT AMSISARFTG GSGSFSRPWV 600 HNGMNIDEAQ VTAQKLPEDA SMPYSLEMNT KDGRNETASV TPTGCRLFGI SLTADTSPQN 660 ASSQARKHGW EGN*

Sequence ? help Back to Top

Protein Sequence Length: 674 aa Download sequence

MELDGHHAVR VEERKNAYVS CDGDCGDKAG CARCLSSSSS SSSSSNSPAS LASSSIYVEL  60
WHACAGPLTA LPKKGNVVVY FPQGHLEQVA SNSPFSPTDM PTYDLQPQIF CRVVNVQRLA  120
NKENDEVYTQ LSLLPQPELV GSSLSRSDLL SANGNDEPAL KSTPHMFCKT LTASDTSTHG  180
GFSVPRRAAE DCFPPLDYKQ QRPSQELVAK DLHGVGWRFR HIYRGQPRRH LLTTGWSLFV  240
SQKNLGLGDA VLFLRGENGE LRLGIRRAVR PRNCLPDSSI GNHSSLPTVL SSVASAILTK  300
NIFHVFYSPR ATHADFVIPI QKYMKSIINP IPTGTRFVMR LEMDDSPERR CSGIVTGLGD  360
LDPYRWPNSK WRCLTVRWDE GHATNHQERV SPWEVDASIR LPSPLSFHGS PQLKKLRTCL  420
QSSLQSGIAD DISTGRSGFL DFEESIRSSS KVLQGQENSG LPSPLYRGDK VNHPLGCCSE  480
VPYLVNQLLL PPRPDHVTVP ERLNIQTTGY TTLGKSDVFP TVLQGQEVCP YSAWRKSSIG  540
CNMFSTHQRP KPSFYPVGSA GSRSVYFPPH SRIQKEMQGT AMSISARFTG GSGSFSRPWV  600
HNGMNIDEAQ VTAQKLPEDA SMPYSLEMNT KDGRNETASV TPTGCRLFGI SLTADTSPQN  660
ASSQARKHGW EGN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein