PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0098s0168.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

ARF

Protein Properties

Length: 702aa MW: 77801.1 Da PI: 8.3758

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0098s0168.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	71.9	8.2e-23	68	169	1	99
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g W++++iyr++++r++lt+GW+ Fv++++L gD v+F Kaladp0098s0168.3.p 68 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVGWRFRHIYRGQPRRHLLTTGWSLFVSQKNLGLGDAVLFL- 155 99**************************963.3445679********************************************. PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 + +++el+++++r+ Kaladp0098s0168.3.p 156 -RGENGELRLGIRRA 169 .4499999**996 PP
2	Auxin_resp	105.3	7.3e-35	194	275	1	82
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+ tk++F+v+Y+Pra++++Fv++++k++k++ +++ G+Rf m++e++ds+err+sG+v+g+ dldp+rWpnSkWr+L Kaladp0098s0168.3.p 194 VASAILTKNIFHVFYSPRATHADFVIPIQKYMKSIINPIPTGTRFVMRLEMDDSPERRCSGIVTGLGDLDPYRWPNSKWRCL 275 678999***************************************************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 702 aa Download sequence
MPTYDLQPQI FCRVVNVQRL ANKENDEVYT QLSLLPQPEL VGSSLSRSDL LSANGNDEPA 60 LKSTPHMFCK TLTASDTSTH GGFSVPRRAA EDCFPPLDYK QQRPSQELVA KDLHGVGWRF 120 RHIYRGQPRR HLLTTGWSLF VSQKNLGLGD AVLFLRGENG ELRLGIRRAV RPRNCLPDSS 180 IGNHSSLPTV LSSVASAILT KNIFHVFYSP RATHADFVIP IQKYMKSIIN PIPTGTRFVM 240 RLEMDDSPER RCSGIVTGLG DLDPYRWPNS KWRCLTVRWD EGHATNHQER VSPWEVDASI 300 RLPSPLSFHG SPQLKKLRTC LQSSLQSGIA DDISTGRSGF LDFEESIRSS SKVLQGQENS 360 GLPSPLYRGD KVNHPLGCCS EVPYLVNQLL LPPRPDHVTV PERLNIQTTG YTTLGKSDVF 420 PTVLQGQEVC PYSAWRKSSI GCNMFSTHQR PKPSFYPVGS AGSRSVYFPP HSRIQKEMQG 480 TAMSISARFT GGSGSFSRPW VHNGMNIDEA QVTAQKLPED ASMPYSLEMN TKDGRNETAS 540 VTPTGCRLFG ISLTADTSPQ NASKRSCTKV HKQGSMVGRA IDLSKLNGYT DLLFELEWLF 600 GMEGLLRDPQ KGWRILYTDS QNNMMAVGED PWHEFCEAVS KIHIYTKEEV EKLSIGVTSD 660 ETQSCLEEAP GDAGVSKSSS AGHPDSSPTK KKGYRVLLLS L*

Sequence ? help Back to Top

Protein Sequence Length: 702 aa Download sequence

MPTYDLQPQI FCRVVNVQRL ANKENDEVYT QLSLLPQPEL VGSSLSRSDL LSANGNDEPA  60
LKSTPHMFCK TLTASDTSTH GGFSVPRRAA EDCFPPLDYK QQRPSQELVA KDLHGVGWRF  120
RHIYRGQPRR HLLTTGWSLF VSQKNLGLGD AVLFLRGENG ELRLGIRRAV RPRNCLPDSS  180
IGNHSSLPTV LSSVASAILT KNIFHVFYSP RATHADFVIP IQKYMKSIIN PIPTGTRFVM  240
RLEMDDSPER RCSGIVTGLG DLDPYRWPNS KWRCLTVRWD EGHATNHQER VSPWEVDASI  300
RLPSPLSFHG SPQLKKLRTC LQSSLQSGIA DDISTGRSGF LDFEESIRSS SKVLQGQENS  360
GLPSPLYRGD KVNHPLGCCS EVPYLVNQLL LPPRPDHVTV PERLNIQTTG YTTLGKSDVF  420
PTVLQGQEVC PYSAWRKSSI GCNMFSTHQR PKPSFYPVGS AGSRSVYFPP HSRIQKEMQG  480
TAMSISARFT GGSGSFSRPW VHNGMNIDEA QVTAQKLPED ASMPYSLEMN TKDGRNETAS  540
VTPTGCRLFG ISLTADTSPQ NASKRSCTKV HKQGSMVGRA IDLSKLNGYT DLLFELEWLF  600
GMEGLLRDPQ KGWRILYTDS QNNMMAVGED PWHEFCEAVS KIHIYTKEEV EKLSIGVTSD  660
ETQSCLEEAP GDAGVSKSSS AGHPDSSPTK KKGYRVLLLS L*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G60450.1	0.0	ARF family protein