PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0098s0168.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ARF | ||||||||
Protein Properties | Length: 703aa MW: 77872.2 Da PI: 8.3758 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 71.9 | 8.2e-23 | 68 | 169 | 1 | 99 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 f+k+lt sd++++g +++p++ ae++ + +++ s++l+ +d++g W++++iyr++++r++lt+GW+ Fv++++L gD v+F Kaladp0098s0168.2.p 68 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVGWRFRHIYRGQPRRHLLTTGWSLFVSQKNLGLGDAVLFL- 155 99****************************963.3445679************************************************. PP -SSSEE..EEEEE-S CS B3 85 dgrsefelvvkvfrk 99 + +++el+++++r+ Kaladp0098s0168.2.p 156 -RGENGELRLGIRRA 169 .4499999****996 PP | |||||||
2 | Auxin_resp | 105.3 | 7.3e-35 | 194 | 275 | 1 | 82 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 +a+a+ tk++F+v+Y+Pra++++Fv++++k++k++ +++ G+Rf m++e++ds+err+sG+v+g+ dldp+rWpnSkWr+L Kaladp0098s0168.2.p 194 VASAILTKNIFHVFYSPRATHADFVIPIQKYMKSIINPIPTGTRFVMRLEMDDSPERRCSGIVTGLGDLDPYRWPNSKWRCL 275 678999***************************************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 703 aa Download sequence |
MPTYDLQPQI FCRVVNVQRL ANKENDEVYT QLSLLPQPEL VGSSLSRSDL LSANGNDEPA 60 LKSTPHMFCK TLTASDTSTH GGFSVPRRAA EDCFPPLDYK QQRPSQELVA KDLHGVGWRF 120 RHIYRGQPRR HLLTTGWSLF VSQKNLGLGD AVLFLRGENG ELRLGIRRAV RPRNCLPDSS 180 IGNHSSLPTV LSSVASAILT KNIFHVFYSP RATHADFVIP IQKYMKSIIN PIPTGTRFVM 240 RLEMDDSPER RCSGIVTGLG DLDPYRWPNS KWRCLTVRWD EGHATNHQER VSPWEVDASI 300 RLPSPLSFHG SPQLKKLRTC LQSSLQSGIA DDISTAGRSG FLDFEESIRS SSKVLQGQEN 360 SGLPSPLYRG DKVNHPLGCC SEVPYLVNQL LLPPRPDHVT VPERLNIQTT GYTTLGKSDV 420 FPTVLQGQEV CPYSAWRKSS IGCNMFSTHQ RPKPSFYPVG SAGSRSVYFP PHSRIQKEMQ 480 GTAMSISARF TGGSGSFSRP WVHNGMNIDE AQVTAQKLPE DASMPYSLEM NTKDGRNETA 540 SVTPTGCRLF GISLTADTSP QNASKRSCTK VHKQGSMVGR AIDLSKLNGY TDLLFELEWL 600 FGMEGLLRDP QKGWRILYTD SQNNMMAVGE DPWHEFCEAV SKIHIYTKEE VEKLSIGVTS 660 DETQSCLEEA PGDAGVSKSS SAGHPDSSPT KKKGYRVLLL SL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G60450.1 | 0.0 | ARF family protein |