PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0098s0168.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ARF
Protein Properties Length: 802aa    MW: 88200.6 Da    PI: 7.9548
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0098s0168.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B371.69.9e-23167268199
                          EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE CS
                   B3   1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkl 84 
                          f+k+lt sd++++g +++p++ ae++      + +++ s++l+ +d++g  W++++iyr++++r++lt+GW+ Fv++++L  gD v+F  
  Kaladp0098s0168.1.p 167 FCKTLTASDTSTHGGFSVPRRAAEDCfppldyK-QQRPSQELVAKDLHGVGWRFRHIYRGQPRRHLLTTGWSLFVSQKNLGLGDAVLFL- 254
                          99****************************963.3445679************************************************. PP

                          -SSSEE..EEEEE-S CS
                   B3  85 dgrsefelvvkvfrk 99 
                           + +++el+++++r+
  Kaladp0098s0168.1.p 255 -RGENGELRLGIRRA 268
                          .4499999****996 PP
2Auxin_resp1058.8e-35293374182
           Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsL 82 
                          +a+a+ tk++F+v+Y+Pra++++Fv++++k++k++ +++  G+Rf m++e++ds+err+sG+v+g+ dldp+rWpnSkWr+L
  Kaladp0098s0168.1.p 293 VASAILTKNIFHVFYSPRATHADFVIPIQKYMKSIINPIPTGTRFVMRLEMDDSPERRCSGIVTGLGDLDPYRWPNSKWRCL 374
                          678999***************************************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 802 aa     Download sequence    
MELDGHHAVR VEERKNAYVS CDGDCGDKAG CARCLSSSSS SSSSSNSPAS LASSSIYVEL  60
WHACAGPLTA LPKKGNVVVY FPQGHLEQVA SNSPFSPTDM PTYDLQPQIF CRVVNVQRLA  120
NKENDEVYTQ LSLLPQPELV GSSLSRSDLL SANGNDEPAL KSTPHMFCKT LTASDTSTHG  180
GFSVPRRAAE DCFPPLDYKQ QRPSQELVAK DLHGVGWRFR HIYRGQPRRH LLTTGWSLFV  240
SQKNLGLGDA VLFLRGENGE LRLGIRRAVR PRNCLPDSSI GNHSSLPTVL SSVASAILTK  300
NIFHVFYSPR ATHADFVIPI QKYMKSIINP IPTGTRFVMR LEMDDSPERR CSGIVTGLGD  360
LDPYRWPNSK WRCLTVRWDE GHATNHQERV SPWEVDASIR LPSPLSFHGS PQLKKLRTCL  420
QSSLQSGIAD DISTAGRSGF LDFEESIRSS SKVLQGQENS GLPSPLYRGD KVNHPLGCCS  480
EVPYLVNQLL LPPRPDHVTV PERLNIQTTG YTTLGKSDVF PTVLQGQEVC PYSAWRKSSI  540
GCNMFSTHQR PKPSFYPVGS AGSRSVYFPP HSRIQKEMQG TAMSISARFT GGSGSFSRPW  600
VHNGMNIDEA QVTAQKLPED ASMPYSLEMN TKDGRNETAS VTPTGCRLFG ISLTADTSPQ  660
NASKRSCTKV HKQGSMVGRA IDLSKLNGYT DLLFELEWLF GMEGLLRDPQ KGWRILYTDS  720
QNNMMAVGED PWHEFCEAVS KIHIYTKEEV EKLSIGVTSD ETQSCLEEAP GDAGVSKSSS  780
AGHPDSSPTK KKGYRVLLLS L*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60450.10.0ARF family protein