PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0096s0157.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | LBD | ||||||||
Protein Properties | Length: 248aa MW: 27069.3 Da PI: 8.8355 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 128.3 | 3.5e-40 | 40 | 141 | 1 | 101 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrrkCa++Cv+apyf ++q +++fa+vhk+FGasnv+kll+++p ++r+d++ +++yeA+ar++dPvyG+v++il+lqqq++ Kaladp0096s0157.1.p 40 PCGACKFLRRKCAAGCVFAPYFGSDQgAARFAAVHKVFGASNVSKLLQHIPVNRRQDTVVTVTYEAQARLSDPVYGCVSTILALQQQVAA 129 7***********************9989************************************************************** PP DUF260 90 lkaelallkeel 101 l++el++++++l Kaladp0096s0157.1.p 130 LQTELSMVQSQL 141 *******99985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 248 aa Download sequence |
MADPPGGRGR ETMSHRKGQS KRPDDEATGR IPAATPTTPP CGACKFLRRK CAAGCVFAPY 60 FGSDQGAARF AAVHKVFGAS NVSKLLQHIP VNRRQDTVVT VTYEAQARLS DPVYGCVSTI 120 LALQQQVAAL QTELSMVQSQ LINRKLAATN SLQTSQQQQL LGPQQQMSSM SSVMMQPAYS 180 NNSSSSNNNN DNNTLMNHLA SFNSNFGAAT CFQPLRLSRH QLQNEDDDEE KSPDAIIFTN 240 DIFHRRH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT3G03760.1 | 5e-53 | LBD family protein |