PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0096s0113.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family MYB
Protein Properties Length: 310aa    MW: 33714.2 Da    PI: 8.2801
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0096s0113.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.22.9e-161360148
                         TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                         +g+W+++Ed++l+d++++ G g+W+t ++  g+ R++k+c++rw +yl
  Kaladp0096s0113.1.p 13 KGAWSKQEDQKLIDYIRKNGEGCWRTLPQAAGLLRCGKSCRLRWINYL 60
                         79******************************99************97 PP
2Myb_DNA-binding51.62.1e-1666111148
                          TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
      Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                          rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l
  Kaladp0096s0113.1.p  66 RGNFAEDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 111
                          8999******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MRKPCCEKQD TNKGAWSKQE DQKLIDYIRK NGEGCWRTLP QAAGLLRCGK SCRLRWINYL  60
RPDLKRGNFA EDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRRKLANMGI  120
DPNNHKLAKH PSLYHPAQSQ APVAGRNDGS KSATKSSNFH KSNNGVQTAE DEQPKPAAAT  180
NCNIIINSAD DDDDDDGQAI SEAASSLEEA PCSSSLPDLN LDLMISTPSS HPAGQKSNPS  240
NYEDQQRVQQ QVDAAGGRWN SGAPAPSAPG GSAYGSVTSQ NQNDASSNKG EKAIVERQGK  300
RKKSLSSEA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38620.11e-76MYB family protein