PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0096s0093.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 298aa    MW: 32632 Da    PI: 7.7576
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0096s0093.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH29.31.6e-09209252755
                          HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                  HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                          ++ ++RR+ri +++  L+el+P+      +K++ +++LekA+ Y+k Lq
  Kaladp0096s0093.1.p 209 IAAKNRRERISERLKILQELVPNG-----TKVDLVTMLEKAIGYVKFLQ 252
                          5679******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MALDSRAHQP HSNSNPSSYY AFGSSSSSAH QHHQVDLYNK DSSLSQVGFH HRRTAKGNDN  60
YLKLHQQGGH MIHGGGAGGK VLSDSNDGSL ITFEDCNEAG GHNYEQNSNT CHNSECFNNS  120
HQTVSSMDSH LLGGANRSHH LKGKLNNRDD MLDWFYSPEA ADNDHTAVHK PPNMDECYMP  180
PNKKQCTSTS TTKKSKPKPA AAAKDPQSIA AKNRRERISE RLKILQELVP NGTKVDLVTM  240
LEKAIGYVKF LQLQVKVLAA DEFWPVQGGK APDLSQVKDA IDAILSSQRS DRNSASD*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G37800.11e-52bHLH family protein