PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0096s0052.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MYB | ||||||||
Protein Properties | Length: 273aa MW: 30528.2 Da PI: 4.8447 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 50.6 | 4.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++lv ++ G +W+++++ g++R++k+c++rw +yl Kaladp0096s0052.1.p 14 KGPWTAEEDKKLVSFITGNGQCCWRAVPKLAGLKRCGKSCRLRWTNYL 61 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.9 | 8.4e-17 | 70 | 111 | 4 | 47 |
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 ++eE+ l +d+++ lG++ W++Ia++++ gRt++++k++w+++ Kaladp0096s0052.1.p 70 LSEEEERLVIDLHASLGNR-WSKIAAKLP-GRTDNEIKNHWNTH 111 599****************.*********.************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 273 aa Download sequence |
MGRQPCCDKL GVKKGPWTAE EDKKLVSFIT GNGQCCWRAV PKLAGLKRCG KSCRLRWTNY 60 LRPDLKRGLL SEEEERLVID LHASLGNRWS KIAAKLPGRT DNEIKNHWNT HIKKKLKKMG 120 IDPITHRPIN KDQESTASVN EINNPNHIKG QLGNADYINV DDEFCEVTTN GSYSVVSSSL 180 GDYRAKESNE SVKAGDSDGE GESKSLMDYV LSEAFWASLD QSELYGEGNA EGLANCWKEE 240 MEEEEEELLG GGSDFGVDWF FNDIIDMNIF NL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G22680.1 | 4e-85 | MYB family protein |