PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0096s0037.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 204aa MW: 21826.4 Da PI: 5.1179 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 53 | 8.8e-17 | 38 | 88 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ r rWv+e+r+p +k++r++lg+f t +Aa+a++ a+++l+g Kaladp0096s0037.1.p 38 PVYRGVRRRN-RDRWVCEVREP---NKKTRIWLGTFPTLVMAARAHDVAALALRG 88 68*****887.8******9998...347*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MDASASSNDD VSSSAPLLAA SNPKRRAGRK KFTETRHPVY RGVRRRNRDR WVCEVREPNK 60 KTRIWLGTFP TLVMAARAHD VAALALRGSR ACLNFADSAW RLPVPGSLDA GEIRRAALEA 120 AEMFRPGTAS FDDGAGSSGS YGGDDDFDDV AIISSDGGSA IGGGGVFELD VEYFLGVNSR 180 ELMVEMAEGL MVAPPPYWEA EGV* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G63030.2 | 1e-22 | ERF family protein |