PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0096s0012.2.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GATA

Protein Properties

Length: 525aa MW: 59080.1 Da PI: 6.5677

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0096s0012.2.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	50.9	2.1e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg+t+TplWR+gp ++ LCnaCG ++r kg+ Kaladp0096s0012.2.p 7 CRHCGVTSTPLWRNGPPDKPVLCNACGSRWRTKGS 41 **************55555*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 525 aa Download sequence
MVKQGPCRHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLTNYTPLHA RAEELDEYED 60 YKASRVRVVN VNKPKEVKLQ KRKRNRNSDV VELGGDFHNY SHSYRRFVDD DTSNRSSSGS 120 GVSNSESFGP FSSTVGSDLT GPEQSVGWEA TVPSKKRTCF GRSKPSPIEK FTQELYTIWQ 180 EQQSYCPESP EEELLYESET PMVSVEIGHG SVLIKHPSEI AHEEDSEASS LSAEVKPYPR 240 TEAHLRPATL FVHKEDKGAA AFQAPRAVKS IRISNPPLMN REQSYRNEAA NVHDIQHLLG 300 RRDSPLCAVD LNDIVNLEEF AAQFTTQEQQ QLLKYLPKSD VERYPISLKS LFDDPLFQES 360 LLSFQRLLAE GVFDLSFPNV EPDDCRNLRR LALSNPLKPN WVALYNLLKS KNRPAAHNVT 420 GSNVMELAKL SQKSQKSGSN LLSKDLNTVK LKHTTQAKEF ADTDRTDFHP KNIFAPPSEN 480 PVSRVTQPLH DADMENDQDL LLDVPSNYAF PQAELLDPNQ CLYR*

Sequence ? help Back to Top

Protein Sequence Length: 525 aa Download sequence

MVKQGPCRHC GVTSTPLWRN GPPDKPVLCN ACGSRWRTKG SLTNYTPLHA RAEELDEYED  60
YKASRVRVVN VNKPKEVKLQ KRKRNRNSDV VELGGDFHNY SHSYRRFVDD DTSNRSSSGS  120
GVSNSESFGP FSSTVGSDLT GPEQSVGWEA TVPSKKRTCF GRSKPSPIEK FTQELYTIWQ  180
EQQSYCPESP EEELLYESET PMVSVEIGHG SVLIKHPSEI AHEEDSEASS LSAEVKPYPR  240
TEAHLRPATL FVHKEDKGAA AFQAPRAVKS IRISNPPLMN REQSYRNEAA NVHDIQHLLG  300
RRDSPLCAVD LNDIVNLEEF AAQFTTQEQQ QLLKYLPKSD VERYPISLKS LFDDPLFQES  360
LLSFQRLLAE GVFDLSFPNV EPDDCRNLRR LALSNPLKPN WVALYNLLKS KNRPAAHNVT  420
GSNVMELAKL SQKSQKSGSN LLSKDLNTVK LKHTTQAKEF ADTDRTDFHP KNIFAPPSEN  480
PVSRVTQPLH DADMENDQDL LLDVPSNYAF PQAELLDPNQ CLYR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	9e-86	GATA family protein