PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0716.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family ERF
Protein Properties Length: 236aa    MW: 26582.3 Da    PI: 5.0351
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0716.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.62.4e-16102152255
                  AP2   2 gykGVrwdkkrgrWvAeIrdpseng..krkrfslgkfgtaeeAakaaiaarkkleg 55 
                          +y+GVr+++ +g+++AeIrd       k  r++lg+f+++ +Aaka++ a+ k++g
  Kaladp0095s0716.1.p 102 HYRGVRRRP-WGKFAAEIRD----RarKGSRVWLGTFDSEVDAAKAYDFAAFKMRG 152
                          8********.**********....33445**********99*************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MDETSTLDLI RSHLLADFSS TESFISSLHS DLLLDSTTGP YDAPFWSLFP VKPETDYSYN  60
LLEFIKPEFF DIAPAQREDT GKTSSSDSCR TETSSLPLDR KHYRGVRRRP WGKFAAEIRD  120
RARKGSRVWL GTFDSEVDAA KAYDFAAFKM RGSKAILNFP LQAGKEEGPP ENSSQRRRRR  180
RDSRAETTAT ESAAGSSSCY FNSNDEDNSY EPWTPSSQNL SFTTTMTMED QMLLA*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1175181QRRRRRR
2176181RRRRRR
3176184RRRRRRDSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G07580.12e-27ERF family protein