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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0095s0442.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | AP2 | ||||||||
Protein Properties | Length: 515aa MW: 55908.4 Da PI: 7.0402 | ||||||||
Description | AP2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 45 | 2.7e-14 | 145 | 204 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s ++GV++++++gr++A+++d + g ++ ++++lg ++ +++Aa+a++ a++k++g Kaladp0095s0442.1.p 145 SVFRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 204 689******************666664477446**********99*************97 PP | |||||||
2 | AP2 | 46.4 | 9.6e-15 | 249 | 298 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g Kaladp0095s0442.1.p 249 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 298 9***************988532...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 515 aa Download sequence |
MNSNEQHRSG SNWLAFTLSN TKPLSLFHAS SSAAAFGEGG AEEDAAELSM MLGGDGPKLE 60 DFLGASSGSN SNGDGAVVFS QSANNSQQIQ QQQQHHMYEE GSELRTIEAG CFARQNISGG 120 GGIEQRDQQQ PTAKKTVETF GNRTSVFRGV TRHRWTGRYE AHLWDNSCRR EGQSRKGRQV 180 YLGGYDKEDK AARAYDLAAL KYWGLTTTTN FPIGNYEREL EEMQNMTRQE FVASLRRRSS 240 GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD IAAIKFRGLN 300 AVTNFDMSRY DVKSIANNNL PIGGMASKPK MSADSISEGR SDNDRDISES SVSFASPHQE 360 PQPVNNSNLS FALPVKQDPV SSYWPAILGC GSNQITLATP SHNSHSHPIN NYFYSNNPTA 420 TGPQYSNNMN IYCATNGSSM AGSEPGSVGT STVIPYGTPI SMTMTSSSSV VVGTHENVSS 480 SGSGISNWVS PNLPQYQAGK PSLLVFQTPI FGVE* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G57390.1 | 1e-121 | AP2 family protein |