PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0095s0442.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family AP2
Protein Properties Length: 515aa    MW: 55908.4 Da    PI: 7.0402
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0095s0442.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2452.7e-14145204155
                  AP2   1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                          s ++GV++++++gr++A+++d  +   g  ++ ++++lg ++ +++Aa+a++ a++k++g
  Kaladp0095s0442.1.p 145 SVFRGVTRHRWTGRYEAHLWDnSCRrEGqsRKgRQVYLGGYDKEDKAARAYDLAALKYWG 204
                          689******************666664477446**********99*************97 PP

2AP246.49.6e-15249298355
                  AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                          y+GV+++++ grW A+I  +     +k  +lg+f t eeAa+a++ a+ k++g
  Kaladp0095s0442.1.p 249 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 298
                          9***************988532...5************************998 PP

Sequence ? help Back to Top
Protein Sequence    Length: 515 aa     Download sequence    
MNSNEQHRSG SNWLAFTLSN TKPLSLFHAS SSAAAFGEGG AEEDAAELSM MLGGDGPKLE  60
DFLGASSGSN SNGDGAVVFS QSANNSQQIQ QQQQHHMYEE GSELRTIEAG CFARQNISGG  120
GGIEQRDQQQ PTAKKTVETF GNRTSVFRGV TRHRWTGRYE AHLWDNSCRR EGQSRKGRQV  180
YLGGYDKEDK AARAYDLAAL KYWGLTTTTN FPIGNYEREL EEMQNMTRQE FVASLRRRSS  240
GFSRGASMYR GVTRHHQHGR WQARIGRVAG NKDLYLGTFS TQEEAAEAYD IAAIKFRGLN  300
AVTNFDMSRY DVKSIANNNL PIGGMASKPK MSADSISEGR SDNDRDISES SVSFASPHQE  360
PQPVNNSNLS FALPVKQDPV SSYWPAILGC GSNQITLATP SHNSHSHPIN NYFYSNNPTA  420
TGPQYSNNMN IYCATNGSSM AGSEPGSVGT STVIPYGTPI SMTMTSSSSV VVGTHENVSS  480
SGSGISNWVS PNLPQYQAGK PSLLVFQTPI FGVE*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57390.11e-121AP2 family protein