PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0095s0414.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 228aa MW: 25955.5 Da PI: 9.1255 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 80.2 | 1.4e-25 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 ri+n + rqvtfskRrng+lKKA+EL +LCdaev v++fsstgk+++++s Kaladp0095s0414.3.p 10 RIDNPTSRQVTFSKRRNGLLKKANELAILCDAEVGVMVFSSTGKVHDFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 74.2 | 3.6e-25 | 78 | 169 | 8 | 98 |
K-box 8 s.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrk 96 + ++++ + +q+e+a L++++++Lq+++R+l+ +dL+ L +k+Lq Le++L+ksl++iR++K++ll+++i el k + +++en +L + Kaladp0095s0414.3.p 78 QlDSSSEIKFWQREAATLRQQLQSLQESHRQLMRDDLSGLGIKDLQDLETHLDKSLRSIRTTKDKLLMDEILELNAKGNIVRQENLELYQ 167 24688999********************************************************************************99 PP K-box 97 kl 98 k+ Kaladp0095s0414.3.p 168 KV 169 96 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 228 aa Download sequence |
MGRGKVVIRR IDNPTSRQVT FSKRRNGLLK KANELAILCD AEVGVMVFSS TGKVHDFASS 60 SMTSVIDRYS KSKEEQQQLD SSSEIKFWQR EAATLRQQLQ SLQESHRQLM RDDLSGLGIK 120 DLQDLETHLD KSLRSIRTTK DKLLMDEILE LNAKGNIVRQ ENLELYQKVY GTKDVHAQCS 180 SITPISRHDL NIGEDAHVPV ELQLCQPQNQ NYETRTRATK LGRLYLQ* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G37940.1 | 3e-82 | MIKC_MADS family protein |