PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0095s0388.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 217aa MW: 23428.7 Da PI: 5.0128 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 136.5 | 9.7e-43 | 36 | 135 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe +r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l Kaladp0095s0388.1.p 36 PCAACKILRRRCADKCVLAPYFPPTEPHKFTIAHRVFGASNIIKFLQELPEAQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVSEL 125 7***************************************************************************************** PP DUF260 91 kaelallkee 100 +a+la+ ++e Kaladp0095s0388.1.p 126 QAQLAKSQAE 135 *****99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MEHRERTSTT PSPTSSLTSS PPSSPSQATT TVIMSPCAAC KILRRRCADK CVLAPYFPPT 60 EPHKFTIAHR VFGASNIIKF LQELPEAQRA DAVSSMVYEA SARIRDPVYG CAGAICQLQK 120 QVSELQAQLA KSQAEIVNMQ AQQAQLVALI CMEMSSVQPS KTTVKTAPDQ SFDCEGFIGS 180 PLVDDFYGGL GFEIESDGMG SLGWETPLWP DVMMTS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28500.1 | 4e-74 | LBD family protein |