PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0095s0014.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 255aa MW: 28932 Da PI: 7.7486 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.3 | 5.3e-25 | 34 | 84 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKAeEL vLCd +v +++fsstgk +eys+ Kaladp0095s0014.3.p 34 KKIDNTTARQVTFSKRRRGLFKKAEELAVLCDSDVGLVVFSSTGKCFEYSN 84 68***********************************************95 PP | |||||||
2 | K-box | 41.1 | 7.6e-15 | 120 | 199 | 20 | 99 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++kL +e+ + + +R++ Ge+Le + +++LqqLe+ Le +l++i ++K ++++i el +k +l een+ Lr++++ Kaladp0095s0014.3.p 120 NYTKLGQEVAEKSSLLRRYRGENLEGMGIEDLQQLEKCLEAGLSRIIETKGGKIMREICELENKGMRLMEENEVLRQQVA 199 6788888888888999*************************************************************986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 255 aa Download sequence |
MSVNSKDFFK KNVPHRLERE KRVSEMAREK IQIKKIDNTT ARQVTFSKRR RGLFKKAEEL 60 AVLCDSDVGL VVFSSTGKCF EYSNCGMQQI LERHHLQSKN LEKLQQPAPS LELQLVEDVN 120 YTKLGQEVAE KSSLLRRYRG ENLEGMGIED LQQLEKCLEA GLSRIIETKG GKIMREICEL 180 ENKGMRLMEE NEVLRQQVAR IPNVYIPHRA NSENRMCEDG QSSESVTNLC ISGGASQDYE 240 SSDISLRLGL PYSG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G22540.1 | 3e-98 | MIKC_MADS family protein |