PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0095s0014.2.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 230aa MW: 25888.5 Da PI: 6.2935 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 78.6 | 4.5e-25 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 k+i+n++ rqvtfskRr g++KKAeEL vLCd +v +++fsstgk +eys+ Kaladp0095s0014.2.p 9 KKIDNTTARQVTFSKRRRGLFKKAEELAVLCDSDVGLVVFSSTGKCFEYSN 59 68***********************************************95 PP | |||||||
2 | K-box | 41.6 | 5.2e-15 | 95 | 174 | 20 | 99 |
K-box 20 elakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++kL +e+ + + +R++ Ge+Le + +++LqqLe+ Le +l++i ++K ++++i el +k +l een+ Lr++++ Kaladp0095s0014.2.p 95 NYTKLGQEVAEKSSLLRRYRGENLEGMGIEDLQQLEKCLEAGLSRIIETKGGKIMREICELENKGMRLMEENEVLRQQVA 174 6788888888888999*************************************************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
MAREKIQIKK IDNTTARQVT FSKRRRGLFK KAEELAVLCD SDVGLVVFSS TGKCFEYSNC 60 GMQQILERHH LQSKNLEKLQ QPAPSLELQL VEDVNYTKLG QEVAEKSSLL RRYRGENLEG 120 MGIEDLQQLE KCLEAGLSRI IETKGGKIMR EICELENKGM RLMEENEVLR QQVARIPNVY 180 IPHRANSENR MCEDGQSSES VTNLCISGGA SQDYESSDIS LRLGLPYSG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22540.1 | 9e-99 | MIKC_MADS family protein |