PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0094s0052.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

GRF

Protein Properties

Length: 330aa MW: 36680.8 Da PI: 8.2495

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0094s0052.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.3	6.6e-24	88	132	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++ +++k+CE+H+hrg++rsrk++e+ Kaladp0094s0052.1.p 88 DQEPGRCRRTDGKKWRCSKEAFQDSKYCEKHMHRGKNRSRKPVEQ 132 689***************************************985 PP
2	QLQ	48.2	3.3e-17	22	56	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +F+a+Q+q+L Q+l++K++a+++PvPp+Ll+ i+ Kaladp0094s0052.1.p 22 PFSASQWQELGEQALIFKHMASGVPVPPDLLFTIR 56 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MIMNGRASAG AGGVNGGGCR FPFSASQWQE LGEQALIFKH MASGVPVPPD LLFTIRRSLD 60 SNKLFAHPAA APHIGWNGFE MGLGRKIDQE PGRCRRTDGK KWRCSKEAFQ DSKYCEKHMH 120 RGKNRSRKPV EQLVVNKTNA ITLTTNCSKS HQSSSVASDN HLSPPACAYY NISHPYHLHS 180 SSSSNSRFDS THIHLHSASY YRSRYDGSSN HGSVLKEVAD EQSQSLLNED SVKGLSSNSW 240 HLMPLTIGMS HQMNDELQES SRCELMTPDD QQQTHKTVYT FLEERPPDKK DSSWLNHDDK 300 SSDSCTAQLL ISIPPATSHH VFPIFNSKS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-48	GRF family protein