PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0093s0154.4.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | YABBY | ||||||||
Protein Properties | Length: 149aa MW: 16347.6 Da PI: 9.7 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 168.1 | 6.1e-52 | 2 | 137 | 23 | 170 |
YABBY 23 avsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsseklsenedeevprv 112 vsvP ts++++vtvrCGhC++llsvn+ q ++ +h+ ++ +++ +e +++++ + ++ s+s+s +s + Kaladp0093s0154.4.p 2 EVSVPCTSMLNIVTVRCGHCANLLSVNMGALLQP-SSIQHFPQQKQQQTGAEGALMTNATNNLNYSSGSSSSSSPS--------KC---N 79 69***********************998766554.34444333333222222222222222222222222222222........11...2 PP YABBY 113 ppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 p+ ekrqrvPsaynrfikeeiqrikasnP+ishreafsaaaknWahfP+ihfg+ Kaladp0093s0154.4.p 80 PDKLSAMEKRQRVPSAYNRFIKEEIQRIKASNPEISHREAFSAAAKNWAHFPHIHFGM 137 33455679************************************************95 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 149 aa Download sequence |
MEVSVPCTSM LNIVTVRCGH CANLLSVNMG ALLQPSSIQH FPQQKQQQTG AEGALMTNAT 60 NNLNYSSGSS SSSSPSKCNP DKLSAMEKRQ RVPSAYNRFI KEEIQRIKAS NPEISHREAF 120 SAAAKNWAHF PHIHFGMKKA KFLDQDIN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G08465.1 | 7e-47 | YABBY family protein |