PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0093s0085.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 459aa MW: 50008 Da PI: 7.7754

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0093s0085.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	48.2	2e-15	286	331	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 hn+ Er+RRd+iN+++ +L++l+P++ K +Ka++L ++++Y+k+Lq Kaladp0093s0085.1.p 286 HNQSERKRRDKINQRMKTLQKLVPNS-----NKTDKASMLDEVIDYLKQLQ 331 9**********************7.....5****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 459 aa Download sequence
MSQCVPSWDN NPHNDTYSHT LHPHLPPAPA KQLVHSRNLD SGIVPSSAPE VPAMLDYEVA 60 ELTWENGQLA LHGLGQPRTS GAWQDKHQPG SGTLESIVNQ ATCFFNPNDK SSFDHRAPTA 120 SAAMVMDALV PLCSNTNNNN CNCNNNNNNG NNPDEDSNAR GTVGHTHVGS CSAGMKRTRQ 180 GVRQVPVVGQ DWSARSEYSA NSSRQQQVTV DTCTERDQGT TAFTSTSVWS AENTSSGMPC 240 TRLTGDDHDS ICHSRSIMKN ERGSGENKKQ KASNNSAKRS RAADIHNQSE RKRRDKINQR 300 MKTLQKLVPN SNKTDKASML DEVIDYLKQL QAQVNMMNRM NMPQMAMMPM ALNQQAALQM 360 TMMAQMGMGG MLDMNTAAAM AAGRASMQPI LHPSAAAAAF MPMPPASWDA AAQAMMSDPM 420 SAFLACQQSQ PMTMDAYRMM ASLYQHMQQA QQAPNSKS*

Sequence ? help Back to Top

Protein Sequence Length: 459 aa Download sequence

MSQCVPSWDN NPHNDTYSHT LHPHLPPAPA KQLVHSRNLD SGIVPSSAPE VPAMLDYEVA  60
ELTWENGQLA LHGLGQPRTS GAWQDKHQPG SGTLESIVNQ ATCFFNPNDK SSFDHRAPTA  120
SAAMVMDALV PLCSNTNNNN CNCNNNNNNG NNPDEDSNAR GTVGHTHVGS CSAGMKRTRQ  180
GVRQVPVVGQ DWSARSEYSA NSSRQQQVTV DTCTERDQGT TAFTSTSVWS AENTSSGMPC  240
TRLTGDDHDS ICHSRSIMKN ERGSGENKKQ KASNNSAKRS RAADIHNQSE RKRRDKINQR  300
MKTLQKLVPN SNKTDKASML DEVIDYLKQL QAQVNMMNRM NMPQMAMMPM ALNQQAALQM  360
TMMAQMGMGG MLDMNTAAAM AAGRASMQPI LHPSAAAAAF MPMPPASWDA AAQAMMSDPM  420
SAFLACQQSQ PMTMDAYRMM ASLYQHMQQA QQAPNSKS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	290	295	ERKRRD
2	291	296	RKRRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00050.1	7e-62	bHLH family protein