PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0093s0004.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 247aa MW: 28281.2 Da PI: 8.4317 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.8 | 1.1e-31 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+iifs++gklye++s Kaladp0093s0004.1.p 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 93.9 | 2.7e-31 | 86 | 172 | 13 | 99 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++++ +qe+ kLk ++e Lq++qR+llGedL +L+ keL+q+e+qLe slk+iRs+K++++l+q+ +lq ke++l e+nkaL++kle Kaladp0093s0004.1.p 86 DTQNNYQEYLKLKGRVEALQKTQRNLLGEDLAQLNTKELEQIEHQLEISLKQIRSTKTQYMLDQLADLQLKEQNLLETNKALKQKLE 172 6899*********************************************************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIIFSN RGKLYEFCSS 60 PSIIKTLERY HQCSYSALEA SRPHFDTQNN YQEYLKLKGR VEALQKTQRN LLGEDLAQLN 120 TKELEQIEHQ LEISLKQIRS TKTQYMLDQL ADLQLKEQNL LETNKALKQK LEDNMERVQF 180 PQPWEEGAGH NNIPYIRLAT HSEAAFYQPI GFNPTMQLGY NNAGGNEVDG VNQPHAIGGL 240 MPGWFL* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15800.1 | 3e-98 | MIKC_MADS family protein |