PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0092s0234.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

LBD

Protein Properties

Length: 373aa MW: 42437.6 Da PI: 5.0188

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0092s0234.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	122.7	2e-38	43	142	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleql 90 aCaaCk++rrkC+++C+l+pyfp++++++f n+hklFG+sn++k++++l++ ++++am+++++++++ra+dPv G++++i++lq +e Kaladp0092s0234.1.p 43 ACAACKYQRRKCEPNCILSPYFPHNRQAQFLNAHKLFGVSNITKIIRNLSPADKDQAMKTIIFQSDVRANDPVGGCYRIIRELQFMIEYY 132 7*************************************************************************************** PP DUF260 91 kaelallkee 100 +ael+l+ ++ Kaladp0092s0234.1.p 133 QAELDLVLHQ 142 **998776 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MQLPRAPAFG NATGISPHLP KKMNPPTTTN TIPRIKNNTT TQACAACKYQ RRKCEPNCIL 60 SPYFPHNRQA QFLNAHKLFG VSNITKIIRN LSPADKDQAM KTIIFQSDVR ANDPVGGCYR 120 IIRELQFMIE YYQAELDLVL HQLSICRAQQ AQAQPQAHNK DNQQEQDDQQ QQQQQYLPFM 180 TSDQAANNNC SDPSSDVINA DPLNAYSPSS LQYSYHHQQQ QQLHLQLGGN NSNRGEEDNF 240 VLVQDNDHRY NNIQANADVW AVQHEEQQEQ MVNYCLNNNV EEDQNNSKDS FDQKKDLADN 300 MPCFERSTDK HKFNIEEDHA DGESSHEEAV LNGSKTLCRV EESDSVQNQG YEDEESADAW 360 FALTNCKRIK TA*

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MQLPRAPAFG NATGISPHLP KKMNPPTTTN TIPRIKNNTT TQACAACKYQ RRKCEPNCIL  60
SPYFPHNRQA QFLNAHKLFG VSNITKIIRN LSPADKDQAM KTIIFQSDVR ANDPVGGCYR  120
IIRELQFMIE YYQAELDLVL HQLSICRAQQ AQAQPQAHNK DNQQEQDDQQ QQQQQYLPFM  180
TSDQAANNNC SDPSSDVINA DPLNAYSPSS LQYSYHHQQQ QQLHLQLGGN NSNRGEEDNF  240
VLVQDNDHRY NNIQANADVW AVQHEEQQEQ MVNYCLNNNV EEDQNNSKDS FDQKKDLADN  300
MPCFERSTDK HKFNIEEDHA DGESSHEEAV LNGSKTLCRV EESDSVQNQG YEDEESADAW  360
FALTNCKRIK TA*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13850.1	1e-51	LBD family protein