PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0091s0023.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 661aa MW: 72164.5 Da PI: 6.1407

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0091s0023.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.3	1.2e-12	476	521	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ K++Ka+ L A+ YI++L Kaladp0091s0023.1.p 476 NHVEAERQRREKLNQKFYALRAVVPNV-----SKMDKASLLGDAISYINEL 521 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 661 aa Download sequence
MVDYRSPAMN LWSDDNGSMM MEAFMSSSDL ASLWPPPTPT PGTTGSLPPT SSSMFQSQPI 60 LNQETLQQRL LTLIDGARES WTYAIFWQSS FDNTSGAAHL GWGDGYYRGE ENRQRQQTTF 120 SAAEQENRKK VLRELTSLIS GSSSSSDAVV DDEVTDTEWF FLVSMTQSFT SGVGLPGQAF 180 MSSIPIWVTG SDTLTGSGCE RARQGQVFGL QTMVCVPMAN GVVELGSTEP IYQNSDLMNK 240 VRILFNFNGG GELGSPSWPV SSAAVEDPNW SSDPGHVSGQ EPGKVYHQAE SADTKNNLNT 300 SNLASASAGA AHMFQQQQQH AGPTTHSFFR KDLNFGEYGY GGHSNSTNLV NGSAAATPSF 360 LKPEAGEILS FGESKRIVSS LYSGQSQIAA VDEKSSKKRR TTSLSRESNE EGMLSFTSGV 420 IVPSTGMVRS SGGGLGGVDS EHSDLEPSVV KEPVMEPEKK RKRGRKPANG REEPLNHVEA 480 ERQRREKLNQ KFYALRAVVP NVSKMDKASL LGDAISYINE LRSKLQAAEA DKEGLVSDCE 540 SLKKELISKE MSRYPVASTH GPGRKEFNQS NQHANKLLDL DVDVKIIGWD AMIRVQSNKK 600 NHPAARLMTA LKELDLEVHH VSVSVVNDLM IQQATVKMGT RFYTQDQLRM TLTSKISDTH 660 *

Sequence ? help Back to Top

Protein Sequence Length: 661 aa Download sequence

MVDYRSPAMN LWSDDNGSMM MEAFMSSSDL ASLWPPPTPT PGTTGSLPPT SSSMFQSQPI  60
LNQETLQQRL LTLIDGARES WTYAIFWQSS FDNTSGAAHL GWGDGYYRGE ENRQRQQTTF  120
SAAEQENRKK VLRELTSLIS GSSSSSDAVV DDEVTDTEWF FLVSMTQSFT SGVGLPGQAF  180
MSSIPIWVTG SDTLTGSGCE RARQGQVFGL QTMVCVPMAN GVVELGSTEP IYQNSDLMNK  240
VRILFNFNGG GELGSPSWPV SSAAVEDPNW SSDPGHVSGQ EPGKVYHQAE SADTKNNLNT  300
SNLASASAGA AHMFQQQQQH AGPTTHSFFR KDLNFGEYGY GGHSNSTNLV NGSAAATPSF  360
LKPEAGEILS FGESKRIVSS LYSGQSQIAA VDEKSSKKRR TTSLSRESNE EGMLSFTSGV  420
IVPSTGMVRS SGGGLGGVDS EHSDLEPSVV KEPVMEPEKK RKRGRKPANG REEPLNHVEA  480
ERQRREKLNQ KFYALRAVVP NVSKMDKASL LGDAISYINE LRSKLQAAEA DKEGLVSDCE  540
SLKKELISKE MSRYPVASTH GPGRKEFNQS NQHANKLLDL DVDVKIIGWD AMIRVQSNKK  600
NHPAARLMTA LKELDLEVHH VSVSVVNDLM IQQATVKMGT RFYTQDQLRM TLTSKISDTH  660
*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	458	467	EKKRKRGRKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G32640.1	1e-177	bHLH family protein