PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0090s0074.1.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

bHLH

Protein Properties

Length: 473aa MW: 52322.2 Da PI: 5.983

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0090s0074.1.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	34.7	3.1e-11	285	331	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h e+Er RR+++N++f Lr ++P+ +++Ka+ L Av YI++L Kaladp0090s0074.1.p 285 VNHVEAERMRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVLYINEL 331 689**********************6.....4*************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MEEQEELVIS NTRQPPSCSS TCLSHDPRLN TNNLHLFTLH QKLQMLLEVE TPYSMTCWSH 60 AIFWQLTTTA AARPYLAWGD GHIRTSSQYN NSTMQKCQWF YMTSVGKSFT SGDGTVVTQA 120 ASGSQPYLWL LLNGNTYNCT RANQARINGI QTFVCVPVDG GVLELASCHA VPDSWLLLRQ 180 VIEPLFDSHP NHDRPFFSMP AGCFDDVSFS DIPIISGEKS DDPARDDDDN LDLSRVAKTE 240 MMALAHASSD LDCLFMDSSS SSRKLNQKRR AGRKPAMMQK DAQPVNHVEA ERMRREKLNH 300 RFYALRAVVP NVSRMDKASL LSDAVLYINE LCCKVAHLES SLSKLQASPS SLNNNNNNNS 360 SSSDTTQMMA KQLLPSSSSS CLSLASDDSH NVEVEVRVVG GDAMIRVISE DVDYPAARLM 420 CALREMGLVI HHASVSCVNE LVIQDVLVRV PPGACNEEAY LKSVLIKILE TP*

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MEEQEELVIS NTRQPPSCSS TCLSHDPRLN TNNLHLFTLH QKLQMLLEVE TPYSMTCWSH  60
AIFWQLTTTA AARPYLAWGD GHIRTSSQYN NSTMQKCQWF YMTSVGKSFT SGDGTVVTQA  120
ASGSQPYLWL LLNGNTYNCT RANQARINGI QTFVCVPVDG GVLELASCHA VPDSWLLLRQ  180
VIEPLFDSHP NHDRPFFSMP AGCFDDVSFS DIPIISGEKS DDPARDDDDN LDLSRVAKTE  240
MMALAHASSD LDCLFMDSSS SSRKLNQKRR AGRKPAMMQK DAQPVNHVEA ERMRREKLNH  300
RFYALRAVVP NVSRMDKASL LSDAVLYINE LCCKVAHLES SLSKLQASPS SLNNNNNNNS  360
SSSDTTQMMA KQLLPSSSSS CLSLASDDSH NVEVEVRVVG GDAMIRVISE DVDYPAARLM  420
CALREMGLVI HHASVSCVNE LVIQDVLVRV PPGACNEEAY LKSVLIKILE TP*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	2e-40	bHLH family protein