PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0089s0089.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | LBD | ||||||||
Protein Properties | Length: 222aa MW: 24093.5 Da PI: 7.0897 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 127.3 | 7.2e-40 | 7 | 107 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleq 89 +C aCk+lrrkC+k+Cv+apyf++eq +++fa++hk+FGasnv+kll++lp ++r++a+ ++ yeA+ar++dP+yG+v++i++lqqq+ + Kaladp0089s0089.1.p 7 PCGACKFLRRKCVKGCVFAPYFCHEQgAAHFAAIHKVFGASNVSKLLSHLPISDRSEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVT 96 7*************************89************************************************************** PP DUF260 90 lkaelallkee 100 l+++la+l+++ Kaladp0089s0089.1.p 97 LQSQLASLRHQ 107 *******9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MTGSGSPCGA CKFLRRKCVK GCVFAPYFCH EQGAAHFAAI HKVFGASNVS KLLSHLPISD 60 RSEAAVTISY EAQARLQDPI YGCVSHIFAL QQQVVTLQSQ LASLRHQAAQ SLANGSSSII 120 GNTMNHQDTQ QSWYQSGLSH TLNQFTQQNN HLNFHHQNVQ FSQSNPMNVG NSSMGNSGNA 180 TLVNNTMNSF GSFEETSDQS FGSNNFDDDL QSVAFGYFQN S* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G42440.1 | 5e-61 | LBD family protein |