PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0089s0013.1.p
Organism
Kalanchoe fedtschenkoi
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family bHLH
Protein Properties Length: 273aa    MW: 29675.2 Da    PI: 9.9288
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0089s0013.1.pgenomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH25.91.8e-08168208954
                          HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                  HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                           r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  Kaladp0089s0013.1.p 168 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 208
                          699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    
MDMMMMLQMD KIPTEYFAAY NENHAYHSSG FSSSMGLFSN NNGVTGNSSA GRGCNNNGAN  60
ITSQFYDSHP PSGTAASSTL SFGNPNGHPI APHFLYNTGN GNKWKASSGD VEDNPFATPA  120
QKRNSMAAMR EMIFRIAAMQ PIHIDPESVK PPKRRNVKIS KDPQSVAARH RRERISERIR  180
ILQRLVPGGT KMDTASMLDE AIHYVKFLKT QVQSLERAQG SSNTNSSNGT IGFPVTMPLS  240
NHHNSSSGSY LTMGKVYQTA AAPQSVQHYG DA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G67060.11e-42bHLH family protein