PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0089s0001.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 237aa MW: 25975.2 Da PI: 9.8729 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 65.6 | 1e-20 | 131 | 181 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +grW AeIrd + g + r++lg+f+taeeAa+a++aa+++l+g+ Kaladp0089s0001.1.p 131 RYRGVRKRP-WGRWSAEIRDrV---G-KCRHWLGTFDTAEEAAQAYDAAARRLRGP 181 59*******.**********55...2.5**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 237 aa Download sequence |
MTHESTTDLP IFSNRIIPPS YSYDPHHLLP PTLLDKDVSY LICNSHHHHH HQPMQTPQPI 60 VDAPPSSHQL LEGIAAVVGL NVLYGVQHHP TTTTAATTTT CMSSSTSVSL LPEREAAKTT 120 AGSGGGEQVI RYRGVRKRPW GRWSAEIRDR VGKCRHWLGT FDTAEEAAQA YDAAARRLRG 180 PKARTNFQIS FSPSSYPFTE SAAAATMLTA SSSRHQHPPT GPTRRRLRPP PAHMLS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G80580.1 | 3e-22 | ERF family protein |