PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Kaladp0088s0022.3.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 118aa MW: 12969.8 Da PI: 10.4249 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 48.5 | 1.2e-15 | 56 | 92 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 C++Cg + Tp++R gp g+k+LCnaCGly++ +g+ Kaladp0088s0022.3.p 56 CTHCGIGSnsTPMMRIGPAGPKSLCNACGLYWKNTGR 92 ****865556***********************9986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 118 aa Download sequence |
MKRCFEKKIR YHVRQKVALR LPRSKGQFFS EKTVDCGGNN TKDSGPSNSL RYLNGCTHCG 60 IGSNSTPMMR IGPAGPKSLC NACGLYWKNT GRLRDLSSRS KASSHDLPEV GHFLHEG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G24470.2 | 4e-35 | GATA family protein |