PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0088s0022.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | GATA | ||||||||
Protein Properties | Length: 120aa MW: 13236.6 Da PI: 10.2773 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 47.2 | 3e-15 | 56 | 89 | 1 | 32 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrk 32 C++Cg + Tp++R gp g+k+LCnaCGly++ Kaladp0088s0022.1.p 56 CTHCGIGSnsTPMMRIGPAGPKSLCNACGLYWKN 89 ****865556**********************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 120 aa Download sequence |
MKRCFEKKIR YHVRQKVALR LPRSKGQFFS EKTVDCGGNN TKDSGPSNSL RYLNGCTHCG 60 IGSNSTPMMR IGPAGPKSLC NACGLYWKNT VLSLLFPFPT ISVLKLLSHC LLSVHCLFN* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G24470.2 | 9e-31 | GATA family protein |