PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Kaladp0087s0163.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
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Family | ERF | ||||||||
Protein Properties | Length: 233aa MW: 25981.9 Da PI: 6.273 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.2 | 4.8e-19 | 18 | 68 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s+++GVr+++ +grWvAeI+d + ++ r +lg+f taeeAa+a+++a+ l+g Kaladp0087s0163.1.p 18 SKFTGVRQRP-SGRWVAEIKDTT---QKIRMWLGTFETAEEAARAYDEAACLLRG 68 79********.7*********32...35**********************99987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 233 aa Download sequence |
MNKSVCNSVG NFKGKSRSKF TGVRQRPSGR WVAEIKDTTQ KIRMWLGTFE TAEEAARAYD 60 EAACLLRGSN TRTNFATRVS SNSPLALRIQ NLLKKRNGTK VEQQSSTVQS EALSPTCSIN 120 TSLFSKNVTC TSSDMAGDAQ FHDHTCRPDL TDASETTWEL NGFLYTQESL DTPKTELDCT 180 RNSEFSEFER MKVERQISAS LYALNGVQEY MDTVNDVTDA FWDLPPLCSL SH* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G19790.1 | 9e-43 | ERF family protein |