PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Kaladp0087s0083.3.p

Organism

Kalanchoe fedtschenkoi

Taxonomic ID

63787

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe

Family

E2F/DP

Protein Properties

Length: 466aa MW: 51343.2 Da PI: 4.8699

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Kaladp0087s0083.3.p	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	85.9	3.1e-27	136	201	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+g+++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+irwkg Kaladp0087s0083.3.p 136 RYDSSLGLLTKKFINLIKHAEDGMLDLNKAAETL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIRWKG 201 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MSEPRASNRS APAPPQPTKR HLPFTSIKPP FPAPAAADYH RFDDRKFGGH DADAIVVRSP 60 LKRKSMADDN EVASSNWTNS TVYTEVDKSP LKKPVSAKGG RVYNKSKGSK GNKAAAQTPL 120 LTAGSPSALT SAGNCRYDSS LGLLTKKFIN LIKHAEDGML DLNKAAETLE VQKRRIYDIT 180 NVLEGIGLIE KKLKNRIRWK GLDVSQPDGV ETDVSRLQID VENLNLEEQN LDDQIRGMQE 240 RLRDLSEDEN NQKWLFVTEE DIKSLPCFQN ETLIAIKAPH GTTLEVPDPD EAANFPQRRY 300 RIVLRSTMGP IDVYLVSQFE EKFEDLNGAE QSVNCPVAST SRPVENSGTR VANAQSTEND 360 ITGQAQDAHR VPSDTLMNDN GSDDFVGGIM KIVPDVNADT DYWFLSDAEL SVTELWHPES 420 GIGNHLDDMP HHTDYDIGDT SIPQPQTPPS ALMDIPSSSV NSTPR*

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MSEPRASNRS APAPPQPTKR HLPFTSIKPP FPAPAAADYH RFDDRKFGGH DADAIVVRSP  60
LKRKSMADDN EVASSNWTNS TVYTEVDKSP LKKPVSAKGG RVYNKSKGSK GNKAAAQTPL  120
LTAGSPSALT SAGNCRYDSS LGLLTKKFIN LIKHAEDGML DLNKAAETLE VQKRRIYDIT  180
NVLEGIGLIE KKLKNRIRWK GLDVSQPDGV ETDVSRLQID VENLNLEEQN LDDQIRGMQE  240
RLRDLSEDEN NQKWLFVTEE DIKSLPCFQN ETLIAIKAPH GTTLEVPDPD EAANFPQRRY  300
RIVLRSTMGP IDVYLVSQFE EKFEDLNGAE QSVNCPVAST SRPVENSGTR VANAQSTEND  360
ITGQAQDAHR VPSDTLMNDN GSDDFVGGIM KIVPDVNADT DYWFLSDAEL SVTELWHPES  420
GIGNHLDDMP HHTDYDIGDT SIPQPQTPPS ALMDIPSSSV NSTPR*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36010.1	1e-148	E2F/DP family protein